viral-pipelines CI

Merge branch 'master' into ct-bugfix-dx-deploy-failures #2687

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Run time

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Job	Run time
validate_wdl_miniwdl	1m 29s
test_docs	1m 21s
validate_wdl_womtool	3m 4s
test_miniwdl	57s
deploy_dnanexus	0s
test_cromwell	2m 1s
	8m 52s