Update LongReadsContaminationEstimation.wdl #1103

	name: validate-dockstore-yaml
	on: push
	jobs:
	publish-test:
	runs-on: ubuntu-latest
	steps:
	- name: Checkout branch
	uses: actions/checkout@v3

	- name: Setup Java 17
	uses: actions/setup-java@v2
	with:
	distribution: 'temurin'
	java-version: '17'

	- name: Cache node_modules
	uses: actions/cache@v2
	with:
	path: "**/node_modules"
	key: ${{ runner.os }}-modules-${{ env.cache-name }}-${{ hashFiles('**/yarn.lock') }}

	- name: Install dockstore cli
	run: \|
	mkdir -p ~/bin
	curl -L -o ~/bin/dockstore https://github.com/dockstore/dockstore-cli/releases/download/1.14.0/dockstore
	chmod +x ~/bin/dockstore
	export PATH=~/bin:$PATH

	mkdir -p ~/.dockstore
	printf "token: 19dd4c1120940ea0f604cc856826d58eae108eeb72b8bb6186a8ce0e60b96637\nserver-url: https://dockstore.org/api\n" > ~/.dockstore/config

	dockstore --version

	- name: Validate dockstore.yml
	run: \|
	export PATH=~/bin:$PATH

	validation_output=$(dockstore yaml validate --path .)
	echo "$validation_output"

	if [[ $validation_output == "Your .dockstore.yml has the following errors" \|\| $validation_output == "Your .dockstore.yml is invalid" ]]; then
	echo "Dockstore validation failed."
	exit 1
	fi

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