-
Notifications
You must be signed in to change notification settings - Fork 590
New issue
Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.
By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.
Already on GitHub? Sign in to your account
#259 Inline schema for importgenomes.wdl #7171
Conversation
There was a problem hiding this comment.
Choose a reason for hiding this comment
The reason will be displayed to describe this comment to others. Learn more.
just something to simplify a bit
File metadata_schema | ||
String? pet_schema | ||
String? vet_schema | ||
String? metadata_schema |
There was a problem hiding this comment.
Choose a reason for hiding this comment
The reason will be displayed to describe this comment to others. Learn more.
I believe you can just do this with
String? metadata_schema = "sample_name:STRING,sample_id:INTEGER,interval_list_blob:STRING,inferred_state:STRING"
it's a little more straightforward, less variables/code... but please verify it works :D should also work for the other schemas
There was a problem hiding this comment.
Choose a reason for hiding this comment
The reason will be displayed to describe this comment to others. Learn more.
you also then wouldn't need to change all the "metadata_schema" to "metadata_inline_schema" below
* inline schemas * inline schema testing * remove new lines in strings for schema def * formatting of if else values * replace dockstore yml to original * reorganize where default values are to workflow input block
No description provided.