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handle normal reads in validation sample in BasicSomaticValidator #5322

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merged 1 commit into from
Oct 18, 2018

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davidbenjamin
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@takutosato This is for MC3.

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@takutosato takutosato left a comment

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Looks good!

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Codecov Report

Merging #5322 into master will decrease coverage by 0.001%.
The diff coverage is 25%.

@@               Coverage Diff               @@
##              master     #5322       +/-   ##
===============================================
- Coverage     86.793%   86.792%   -0.001%     
  Complexity     30107     30107               
===============================================
  Files           1842      1842               
  Lines         139393    139395        +2     
  Branches       15369     15370        +1     
===============================================
  Hits          120984    120984               
- Misses         12823     12824        +1     
- Partials        5586      5587        +1
Impacted Files Coverage Δ Complexity Δ
...tmutpileup/ValidateBasicSomaticShortMutations.java 80.172% <25%> (-0.529%) 19 <0> (ø)
...oadinstitute/hellbender/utils/gcs/BucketUtils.java 80.488% <0%> (-0.61%) 42% <0%> (ø)

@davidbenjamin davidbenjamin merged commit 6d25f29 into master Oct 18, 2018
@davidbenjamin davidbenjamin deleted the db_mc3 branch October 18, 2018 15:30
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3 participants