Create tools for SV VCF cleaning #4780

Job	Run time
Validate generated WDLs using womtools	13m 44s
Validate script WDLs using womtools	54s
check if the environment has privileges	1s
build and push gatk docker to artifacts	15m 56s
WDL test RUN_CNV_GERMLINE_COHORT_WDL on cromwell	25m 34s
WDL test RUN_CNV_GERMLINE_CASE_WDL on cromwell	27m 35s
WDL test RUN_CNV_SOMATIC_WDL on cromwell	25m 59s
WDL test RUN_M2_WDL on cromwell	16m 39s
WDL test RUN_VCF_SITE_LEVEL_FILTERING_WDL on cromwell	13m 0s
Java 17.0.6+10 build and test cloud	14m 38s
Java 17.0.6+10 build and test integration	30m 1s
Java 17.0.6+10 build and test unit	18m 8s
Java 17.0.6+10 test on docker integration	35m 25s
Java 17.0.6+10 test on docker unit	20m 14s
Java 17.0.6+10 test on docker variantcalling	27m 56s
Java 17.0.6+10 test on docker conda	24m 55s
	5h 10m 39s

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