Update melt docker image to current latest build. #592
Conversation
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
mwalker174
approved these changes
Aug 30, 2023
|
Thanks @mwalker174! |
mwalker174
pushed a commit
that referenced
this pull request
Aug 31, 2023
Add scramble dockerfile and update wdl Create /app dir Add docker Rscript test Delete backslash Update scramble docker Bump Part1 memory to 3gb Add cores option to scramble R script Fix wdls Add bcftools to docker Update docker; 15 cores cores -> threads Update scramble repo commit Fix dockerfile Update scramble docker Try 2 cores in Part1 Update runtimes Update ubuntu, htslib, bcftools versions Add wget wget install Move wget install install just bcftools and htslib Clean up bcftools source Delete backslash Update docker
Sign up for free
to join this conversation on GitHub.
Already have an account?
Sign in to comment
Add this suggestion to a batch that can be applied as a single commit.
This suggestion is invalid because no changes were made to the code.
Suggestions cannot be applied while the pull request is closed.
Suggestions cannot be applied while viewing a subset of changes.
Only one suggestion per line can be applied in a batch.
Add this suggestion to a batch that can be applied as a single commit.
Applying suggestions on deleted lines is not supported.
You must change the existing code in this line in order to create a valid suggestion.
Outdated suggestions cannot be applied.
This suggestion has been applied or marked resolved.
Suggestions cannot be applied from pending reviews.
Suggestions cannot be applied on multi-line comments.
Suggestions cannot be applied while the pull request is queued to merge.
Suggestion cannot be applied right now. Please check back later.
Given the license requirements of MELT, this image is not built and pushed to container registries using the GitHub actions. Hence, the latest builds of this image should be manually kept in synch between GCR and ACR. The image currently referenced for ACR is an older build than the image on GCR, and it does not include samtools. This PR updates the Docker image tag of MELT on ACR to the current latest tag on GCR.