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Set TMPDIR and HOME as expected by CWL conformance tests. #3223

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merged 1 commit into from
Feb 1, 2018

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mcovarr
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@mcovarr mcovarr commented Jan 31, 2018

Possibly the first in a series as I trace down two other classes of failures.

@@ -114,7 +114,7 @@ trait StandardAsyncExecutionActor extends AsyncBackendJobExecutionActor with Sta
lazy val scriptEpilogue = configurationDescriptor.backendConfig.as[Option[String]]("script-epilogue").getOrElse("sync")

lazy val temporaryDirectory = configurationDescriptor.backendConfig
.as[Option[String]]("temporary-directory").getOrElse("""$(mktemp -d "$PWD"/tmp.XXXXXX)""")
.as[Option[String]]("temporary-directory").getOrElse(s"""$$(mkdir -p "${runtimeEnvironment.tempPath}" && echo "${runtimeEnvironment.tempPath}")""")
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ToL is this still temporary?

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not sure I understand the question?

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3 participants