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  1. abstar abstar Public

    VDJ assignment and antibody sequence annotation. Scalable from a single sequence to billions of sequences.

    Python 42 17

  2. grp-paper grp-paper Public

    Code and data used in The Great Repertoire Project

    Jupyter Notebook 29 10

  3. BALM-paper BALM-paper Public

    Jupyter Notebook 16 5

  4. antiref antiref Public

    AntiRef: reference clusters of human antibody sequences

    Jupyter Notebook 11 3

  5. abutils abutils Public

    Python 7 4

  6. scab scab Public

    Python 4 3

Repositories

Showing 10 of 19 repositories
  • jupyterhub-config Public
    brineylab/jupyterhub-config’s past year of commit activity
    Python 0 0 0 0 Updated Dec 20, 2024
  • BALM Public

    BALM: baseline antiobdy language model

    brineylab/BALM’s past year of commit activity
    Python 0 GPL-3.0 2 0 0 Updated Dec 20, 2024
  • abutils Public
    brineylab/abutils’s past year of commit activity
    Python 7 MIT 4 0 1 Updated Dec 20, 2024
  • simco Public
    brineylab/simco’s past year of commit activity
    Python 0 MIT 0 0 0 Updated Dec 5, 2024
  • containers Public
    brineylab/containers’s past year of commit activity
    Dockerfile 0 2 0 0 Updated Dec 3, 2024
  • abstar Public

    VDJ assignment and antibody sequence annotation. Scalable from a single sequence to billions of sequences.

    brineylab/abstar’s past year of commit activity
    Python 42 MIT 17 5 0 Updated Dec 2, 2024
  • lasv-gpc-stabilization Public

    Code for the Lassa GPC stabilization by Subsampled AF2

    brineylab/lasv-gpc-stabilization’s past year of commit activity
    Jupyter Notebook 0 MIT 0 0 0 Updated Nov 18, 2024
  • boltz Public Forked from jwohlwend/boltz

    Official repository for the Boltz-1 biomolecular interaction model

    brineylab/boltz’s past year of commit activity
    Python 0 MIT 166 0 0 Updated Nov 17, 2024
  • taq-ligase-structural-ensemble Public

    Conformational Ensembles for Taq Ligase and Human DNA Ligase I and III

    brineylab/taq-ligase-structural-ensemble’s past year of commit activity
    Jupyter Notebook 0 MIT 0 0 0 Updated Nov 7, 2024
  • preferential-masking-paper Public
    brineylab/preferential-masking-paper’s past year of commit activity
    Jupyter Notebook 0 MIT 0 0 0 Updated Nov 6, 2024
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