Fix unrelated CI failure #1209

Workflow file for this run

	# Licensed to the Apache Software Foundation (ASF) under one
	# or more contributor license agreements. See the NOTICE file
	# distributed with this work for additional information
	# regarding copyright ownership. The ASF licenses this file
	# to you under the Apache License, Version 2.0 (the
	# "License"); you may not use this file except in compliance
	# with the License. You may obtain a copy of the License at
	#
	# http://www.apache.org/licenses/LICENSE-2.0
	#
	# Unless required by applicable law or agreed to in writing,
	# software distributed under the License is distributed on an
	# "AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY
	# KIND, either express or implied. See the License for the
	# specific language governing permissions and limitations
	# under the License.

	name: R

	on:
	push:
	branches:
	- '**'
	- '!dependabot/**'
	tags:
	- '**'
	paths:
	- '.dockerignore'
	- ".github/workflows/r.yml"
	- "ci/docker/**"
	- "ci/etc/rprofile"
	- "ci/scripts/PKGBUILD"
	- "ci/scripts/cpp_*.sh"
	- "ci/scripts/install_minio.sh"
	- "ci/scripts/r_*.sh"
	- "cpp/**"
	- "docker-compose.yml"
	- "r/**"
	pull_request:
	paths:
	- '.dockerignore'
	- ".github/workflows/r.yml"
	- "ci/docker/**"
	- "ci/etc/rprofile"
	- "ci/scripts/PKGBUILD"
	- "ci/scripts/cpp_*.sh"
	- "ci/scripts/install_minio.sh"
	- "ci/scripts/r_*.sh"
	- "cpp/**"
	- "docker-compose.yml"
	- "r/**"

	concurrency:
	group: ${{ github.repository }}-${{ github.head_ref \|\| github.sha }}-${{ github.workflow }}
	cancel-in-progress: true

	permissions:
	contents: read

	env:
	ARCHERY_DEBUG: 1
	DOCKER_VOLUME_PREFIX: ".docker/"

	jobs:
	ubuntu-minimum-cpp-version:
	name: Check minimum supported Arrow C++ Version (${{ matrix.cpp_version }})
	# We don't provide Apache Arrow C++ 15.0.2 deb packages for Ubuntu 24.04.
	# So we use ubuntu-22.04 here.
	runs-on: ubuntu-22.04
	strategy:
	matrix:
	include:
	- cpp_version: "15.0.2"
	steps:
	- name: Checkout Arrow
	uses: actions/checkout@3df4ab11eba7bda6032a0b82a6bb43b11571feac # v4.0.0
	with:
	path: src
	submodules: recursive

	- name: Install Arrow C++ (${{ matrix.cpp_version }})
	run: \|
	sudo apt update
	sudo apt install -y -V ca-certificates lsb-release wget
	wget https://apache.jfrog.io/artifactory/arrow/$(lsb_release --id --short \| tr 'A-Z' 'a-z')/apache-arrow-apt-source-latest-$(lsb_release --codename --short).deb
	sudo apt install -y -V ./apache-arrow-apt-source-latest-$(lsb_release --codename --short).deb
	sudo apt update
	# We have to list all packages to avoid version conflicts.
	sudo apt install -y -V libarrow-dev=${{ matrix.cpp_version }}-1 \
	libarrow-acero-dev=${{ matrix.cpp_version }}-1 \
	libparquet-dev=${{ matrix.cpp_version }}-1 \
	libarrow-dataset-dev=${{ matrix.cpp_version }}-1

	- name: Install checkbashisms
	run: \|
	sudo apt-get install devscripts

	- uses: r-lib/actions/setup-r@v2
	with:
	use-public-rspm: true
	install-r: false

	- uses: r-lib/actions/setup-r-dependencies@v2
	with:
	extra-packages: any::rcmdcheck
	needs: check
	working-directory: src/r

	- uses: r-lib/actions/check-r-package@v2
	with:
	working-directory: src/r
	env:
	LIBARROW_BINARY: "false"
	LIBARROW_BUILD: "false"
	ARROW_R_VERBOSE_TEST: "true"
	ARROW_R_ALLOW_CPP_VERSION_MISMATCH: "true"

	- name: Show install output
	if: always()
	run: find src/r/check -name '00install.out*' -exec cat '{}' \; \|\| true
	shell: bash


	ubuntu:
	name: AMD64 Ubuntu ${{ matrix.ubuntu }} R ${{ matrix.r }} Force-Tests ${{ matrix.force-tests }}
	runs-on: ubuntu-latest
	if: ${{ !contains(github.event.pull_request.title, 'WIP') }}
	timeout-minutes: 75
	strategy:
	fail-fast: false
	matrix:
	r: ["4.4"]
	ubuntu: [24.04]
	force-tests: ["true"]
	env:
	R: ${{ matrix.r }}
	UBUNTU: ${{ matrix.ubuntu }}
	steps:
	- name: Checkout Arrow
	uses: actions/checkout@3df4ab11eba7bda6032a0b82a6bb43b11571feac # v4.0.0
	with:
	fetch-depth: 0
	submodules: recursive
	- name: Free up disk space
	run: \|
	ci/scripts/util_free_space.sh
	- name: Cache Docker Volumes
	uses: actions/cache@13aacd865c20de90d75de3b17ebe84f7a17d57d2 # v4.0.0
	with:
	path: .docker
	# As this key is identical on both matrix builds only one will be able to successfully cache,
	# this is fine as there are no differences in the build
	key: ubuntu-${{ matrix.ubuntu }}-r-${{ matrix.r }}-${{ hashFiles('cpp/src/*/.cc','cpp/src/*/.h)') }}-${{ github.run_id }}
	restore-keys: \|
	ubuntu-${{ matrix.ubuntu }}-r-${{ matrix.r }}-${{ hashFiles('cpp/src/*/.cc','cpp/src/*/.h)') }}-
	ubuntu-${{ matrix.ubuntu }}-r-${{ matrix.r }}-
	- name: Setup Python
	uses: actions/setup-python@0b93645e9fea7318ecaed2b359559ac225c90a2b # v5.3.0
	with:
	python-version: 3.12
	- name: Setup Archery
	run: pip install -e dev/archery[docker]
	- name: Execute Docker Build
	env:
	ARCHERY_DOCKER_USER: ${{ secrets.DOCKERHUB_USER }}
	ARCHERY_DOCKER_PASSWORD: ${{ secrets.DOCKERHUB_TOKEN }}
	run: \|
	source ci/scripts/util_enable_core_dumps.sh
	# Setting a non-default and non-probable Marquesas French Polynesia time
	# it has both with a .45 offset and very very few people who live there.
	archery docker run -e TZ=MART -e ARROW_R_FORCE_TESTS=${{ matrix.force-tests }} ubuntu-r
	- name: Dump install logs
	run: cat r/check/arrow.Rcheck/00install.out
	if: always()
	- name: Dump test logs
	run: cat r/check/arrow.Rcheck/tests/testthat.Rout*
	if: always()
	- name: Save the test output
	if: always()
	uses: actions/upload-artifact@b4b15b8c7c6ac21ea08fcf65892d2ee8f75cf882 # v4.4.3
	with:
	name: test-output-${{ matrix.ubuntu }}-${{ matrix.r }}
	path: r/check/arrow.Rcheck/tests/testthat.Rout*
	- name: Docker Push
	if: >-
	success() &&
	github.event_name == 'push' &&
	github.repository == 'apache/arrow' &&
	github.ref_name == 'main'
	env:
	ARCHERY_DOCKER_USER: ${{ secrets.DOCKERHUB_USER }}
	ARCHERY_DOCKER_PASSWORD: ${{ secrets.DOCKERHUB_TOKEN }}
	continue-on-error: true
	run: archery docker push ubuntu-r

	bundled:
	name: "${{ matrix.config.org }}/${{ matrix.config.image }}:${{ matrix.config.tag }}"
	runs-on: ubuntu-latest
	if: ${{ !contains(github.event.pull_request.title, 'WIP') }}
	timeout-minutes: 60
	strategy:
	fail-fast: false
	matrix:
	config:
	- { org: "rhub", image: "ubuntu-gcc12", tag: "latest" }
	env:
	R_ORG: ${{ matrix.config.org }}
	R_IMAGE: ${{ matrix.config.image }}
	R_TAG: ${{ matrix.config.tag }}
	steps:
	- name: Checkout Arrow
	uses: actions/checkout@3df4ab11eba7bda6032a0b82a6bb43b11571feac # v4.0.0
	with:
	fetch-depth: 0
	submodules: recursive
	- name: Setup Python
	uses: actions/setup-python@0b93645e9fea7318ecaed2b359559ac225c90a2b # v5.3.0
	with:
	python-version: 3.12
	- name: Setup Archery
	run: pip install -e dev/archery[docker]
	- name: Execute Docker Build
	env:
	ARCHERY_DOCKER_USER: ${{ secrets.DOCKERHUB_USER }}
	ARCHERY_DOCKER_PASSWORD: ${{ secrets.DOCKERHUB_TOKEN }}
	run: \|
	source ci/scripts/util_enable_core_dumps.sh
	# Don't set a TZ here to test that case. These builds will have the following warning in them:
	# System has not been booted with systemd as init system (PID 1). Can't operate.
	# Failed to connect to bus: Host is down
	archery docker run -e TZ="" r
	- name: Dump install logs
	run: cat r/check/arrow.Rcheck/00install.out
	if: always()
	- name: Dump test logs
	run: cat r/check/arrow.Rcheck/tests/testthat.Rout*
	if: always()
	- name: Save the test output
	if: always()
	uses: actions/upload-artifact@b4b15b8c7c6ac21ea08fcf65892d2ee8f75cf882 # v4.4.3
	with:
	name: test-output-bundled
	path: r/check/arrow.Rcheck/tests/testthat.Rout*
	- name: Docker Push
	if: >-
	success() &&
	github.event_name == 'push' &&
	github.repository == 'apache/arrow' &&
	github.ref_name == 'main'
	env:
	ARCHERY_DOCKER_USER: ${{ secrets.DOCKERHUB_USER }}
	ARCHERY_DOCKER_PASSWORD: ${{ secrets.DOCKERHUB_TOKEN }}
	continue-on-error: true
	run: archery docker push r

	windows-cpp:
	name: AMD64 Windows C++ RTools ${{ matrix.config.rtools }} ${{ matrix.config.arch }}
	runs-on: windows-2019
	if: ${{ !contains(github.event.pull_request.title, 'WIP') }}
	timeout-minutes: 90
	strategy:
	fail-fast: false
	matrix:
	config:
	- { rtools: 40, arch: 'ucrt64' }
	steps:
	- run: git config --global core.autocrlf false
	- name: Checkout Arrow
	uses: actions/checkout@v4
	with:
	fetch-depth: 0
	- name: Setup ccache
	shell: bash
	run: \|
	ci/scripts/ccache_setup.sh
	echo "CCACHE_DIR=$(cygpath --absolute --windows ccache)" >> $GITHUB_ENV
	- name: Cache ccache
	uses: actions/cache@v4
	with:
	path: ccache
	key: r-${{ matrix.config.rtools }}-ccache-mingw-${{ matrix.config.arch }}-${{ hashFiles('cpp/src/*/.cc','cpp/src/*/.h)') }}-${{ github.run_id }}
	restore-keys: \|
	r-${{ matrix.config.rtools }}-ccache-mingw-${{ matrix.config.arch }}-${{ hashFiles('cpp/src/*/.cc','cpp/src/*/.h)') }}-
	r-${{ matrix.config.rtools }}-ccache-mingw-${{ matrix.config.arch }}-
	- uses: r-lib/actions/setup-r@v2
	with:
	# Note: RTools must be 40 here because RTools40 + ucrt is how we build the Arrow C++
	# static library. The R is not used here but R 4.1 was the last R to use
	# Rtools40.
	r-version: "4.1"
	rtools-version: 40
	Ncpus: 2
	- name: Build Arrow C++
	shell: bash
	env:
	MINGW_ARCH: ${{ matrix.config.arch }}
	run: ci/scripts/r_windows_build.sh
	- name: Rename libarrow.zip
	# So that they're unique when multiple are downloaded in the next step
	shell: bash
	run: mv libarrow.zip libarrow-rtools${{ matrix.config.rtools }}-${{ matrix.config.arch }}.zip
	- uses: actions/upload-artifact@b4b15b8c7c6ac21ea08fcf65892d2ee8f75cf882 # v4.4.3
	with:
	name: libarrow-rtools${{ matrix.config.rtools }}-${{ matrix.config.arch }}.zip
	path: libarrow-rtools${{ matrix.config.rtools }}-${{ matrix.config.arch }}.zip

	windows-r:
	needs: [windows-cpp]
	name: AMD64 Windows R ${{ matrix.config.rversion }}
	runs-on: windows-2019
	if: ${{ !contains(github.event.pull_request.title, 'WIP') }}
	timeout-minutes: 75
	strategy:
	fail-fast: false
	matrix:
	config:
	- { rversion: "release" }

	env:
	ARROW_R_CXXFLAGS: "-Werror"
	_R_CHECK_TESTS_NLINES_: 0
	steps:
	- run: git config --global core.autocrlf false
	- name: Checkout Arrow
	uses: actions/checkout@v4
	with:
	fetch-depth: 0
	# This must be done before r-lib/actions/setup-r because curl in
	# Rtools doesn't work on non Rtools' MSYS2 environment. If we
	# use "shell: bash" after r-lib/actions/setup-r, bash in Rtools
	# is used on non Rtools' MSYS2 environment.
	- name: Install MinIO
	shell: bash
	run: \|
	mkdir -p "$HOME/.local/bin"
	ci/scripts/install_minio.sh latest "$HOME/.local"
	echo "$HOME/.local/bin" >> $GITHUB_PATH
	- run: mkdir r/windows
	- name: Download artifacts
	uses: actions/[email protected]
	with:
	name: libarrow-rtools40-ucrt64.zip
	path: r/windows
	- name: Unzip and rezip libarrows
	shell: bash
	run: \|
	cd r/windows
	ls *.zip \| xargs -n 1 unzip -uo
	rm -rf *.zip
	- uses: r-lib/actions/setup-r@v2
	with:
	r-version: ${{ matrix.config.rversion }}
	Ncpus: 2
	- uses: r-lib/actions/setup-r-dependencies@v2
	env:
	GITHUB_PAT: "${{ github.token }}"
	with:
	# For some arcane reason caching does not work on the windows runners
	# most likely due to https://github.com/actions/cache/issues/815
	cache: false
	working-directory: 'r'
	extra-packages: \|
	any::rcmdcheck
	# TODO(ARROW-17149): figure out why the GCS tests are hanging on Windows
	# - name: Install Google Cloud Storage Testbench
	# shell: bash
	# run: ci/scripts/install_gcs_testbench.sh default
	- name: Check
	shell: Rscript {0}
	run: \|
	# Because we do R CMD build and r/windows is in .Rbuildignore,
	# assemble the libarrow.zip file and pass it as an env var
	setwd("r/windows")
	zip("libarrow.zip", ".")
	setwd("..")

	Sys.setenv(
	RWINLIB_LOCAL = file.path(Sys.getenv("GITHUB_WORKSPACE"), "r", "windows", "libarrow.zip"),
	MAKEFLAGS = paste0("-j", parallel::detectCores()),
	ARROW_R_DEV = TRUE,
	"_R_CHECK_FORCE_SUGGESTS_" = FALSE,
	"_R_CHECK_STOP_ON_INVALID_NUMERIC_VERSION_INPUTS_" = TRUE,
	"_R_CHECK_DONTTEST_EXAMPLES_" = TRUE
	)
	rcmdcheck::rcmdcheck(".",
	build_args = '--no-build-vignettes',
	args = c('--no-manual', '--as-cran', '--ignore-vignettes'),
	error_on = 'warning',
	check_dir = 'check',
	timeout = 3600
	)
	- name: Run lintr
	if: ${{ matrix.config.rversion == 'release' }}
	env:
	NOT_CRAN: "true"
	GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
	shell: Rscript {0}
	working-directory: r
	run: \|
	Sys.setenv(
	RWINLIB_LOCAL = file.path(Sys.getenv("GITHUB_WORKSPACE"), "r", "windows", "libarrow.zip"),
	MAKEFLAGS = paste0("-j", parallel::detectCores()),
	ARROW_R_DEV = TRUE,
	"_R_CHECK_FORCE_SUGGESTS_" = FALSE
	)
	# we use pak for package installation since it is faster, safer and more convenient
	pak::local_install()
	pak::pak("lintr")
	lintr::expect_lint_free()
	- name: Dump install logs
	shell: cmd
	run: cat r/check/arrow.Rcheck/00install.out
	if: always()
	- name: Dump test logs
	shell: bash
	run: find r/check -name 'testthat.Rout*' -exec cat '{}' \; \|\| true
	if: always()

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Fix unrelated CI failure #1209

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Fix unrelated CI failure #1209

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Workflow file for this run