[add] add files to build Docekr image for cvtk package.

docker/Dockerfile

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+
+ARG PYTORCH="2.3.1"
+ARG CUDA="12.1"
+ARG CUDNN="8"
+FROM pytorch/pytorch:${PYTORCH}-cuda${CUDA}-cudnn${CUDNN}-devel
+
+ARG UID
+ARG GID
+ARG USERNAME
+ARG GROUPNAME
+
+#setup environment
+ENV FORCE_CUDA="1" \
+    TORCH_CUDA_ARCH_LIST="6.0 6.1 7.0 7.5 8.0 8.6+PTX" \
+    PATH="/usr/local/cuda/bin:$PATH" \
+    TORCH_NVCC_FLAGS="-Xfatbin -compress-all" \
+    CMAKE_PREFIX_PATH="$(dirname $(which conda))/../" MMCV_WITH_OPS="1"
+
+# installation
+RUN apt update \
+        && apt install -y git libgl1 libglib2.0-0 ffmpeg libturbojpeg libsm6 libxext6 ninja-build libxrender-dev \
+        && apt clean \
+        && rm -rf /var/lib/apt/lists/* \
+        && git clone https://github.com/open-mmlab/mmcv.git -b v2.1.0 mmcv-v2.1.0 \
+        && cd mmcv-v2.1.0 \
+        && pip install --no-cache-dir -r ./requirements/build.txt \
+        && pip install --no-cache-dir .[all] -v \
+        && cd .. \
+        && git clone https://github.com/open-mmlab/mmdetection.git -b v3.3.0 mmdet-v3.3.0 \
+        && cd mmdet-v3.3.0 \
+        && pip install --no-cache-dir -r ./requirements/build.txt \
+        && pip install --no-cache-dir . -v \
+        && cd .. \
+        && rm -rf ./mmcv-v2.1.0  ./mmdet-v3.3.0
+
+
+RUN groupadd -g ${GID} ${GROUPNAME} -f \
+    && useradd -m -s /bin/bash -u ${UID} -g ${GID} ${USERNAME} \
+    && echo 'export PATH=~/.local/bin:${PATH}' >> /home/${USERNAME}/.bashrc
+USER ${USERNAME}
+RUN pip install -U cvtk
+WORKDIR /home/${USERNAME}

docker/README.md

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+# Dockerfile for cvtk package
+
+To build the cvtk Docker image, run the following command.
+
+```bash
+bash build.sh
+```
+
+
+To start the Docker container for the cvtk package after build,
+run the following command.
+If necessary, the directory to mount and the port number
+to communicate with the host
+can be changed by editing the docker-compose.yml file.
+
+
+```bash
+bash run.sh
+```
+
+
+

docker/build.sh

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+#!/bash/bin
+
+sudo env USERNAME="$(id -un)" docker compose build \
+    --build-arg UID="$(id -u)" \
+    --build-arg GID="$(id -g)" \
+    --build-arg USERNAME="$(id -un)" \
+    --build-arg GROUPNAME="$(id -un)"

docker/docker-compose.yml

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+services:
+  devel-env:
+    image: "devel:${USERNAME}"
+    build:
+      context: .
+      dockerfile: Dockerfile
+      args:
+        - UID:1000
+        - GID:1000
+        - USERNAME:ubuntu
+        - GROUPNAME:ubuntu
+    container_name: "DevEnv-${USERNAME}"
+    network_mode: host
+    ports:
+      - "80:80"
+      - "8080:8080"
+    shm_size: "12gb"
+    deploy:
+      resources:
+        reservations:
+          devices:
+            - capabilities: [gpu]
+    volumes:
+      # mounting home directory result in the ambiguity of shell configurations (e.g. .bashrc)
+      - type: bind
+        source: "/home/${USERNAME}/workspace"
+        target: "/home/${USERNAME}/workspace"

docker/run.sh

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+#!/bash/bin
+
+sudo USERNAME="$(id -un)" docker compose run -it --rm \
+    -e UID="$(id -u)" \
+    -e GID="$(id -g)" \
+    -e USERNAME="$(id -un)" \
+    -e GROUPNAME="$(id -un)" \
+    devel-env