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| +1 −0 | .github/PULL_REQUEST_TEMPLATE.md | |
| +37 −11 | CHANGELOG.md | |
| +1 −1 | VERSION | |
| +17 −8 | bwa.wdl | |
| +89 −0 | ccs.wdl | |
| +6 −6 | centrifuge.wdl | |
| +9 −11 | cutadapt.wdl | |
| +1 −1 | fastqc.wdl | |
| +124 −1 | gatk.wdl | |
| +102 −0 | isoseq3.wdl | |
| +157 −0 | lima.wdl | |
| +7 −7 | minimap2.wdl | |
| +164 −0 | rtg.wdl | |
| +1 −4 | samtools.wdl | |
| +1 −1 | scripts | |
| +38 −38 | talon.wdl | |
| +10 −10 | transcriptclean.wdl | |
| +10 −7 | umi-tools.wdl |