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Audit recent python changes #1201

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cthoyt opened this issue Oct 11, 2024 · 0 comments
Open

Audit recent python changes #1201

cthoyt opened this issue Oct 11, 2024 · 0 comments

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@cthoyt
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cthoyt commented Oct 11, 2024

0f3d4fb is one of the last commits I made before I wasn't tracking changes during sabbatical. To see changes to all Python files made since then, run
git diff --name-only 0f3d4fbe9 HEAD -- "*.py". This gives:

docs/source/conf.py
src/bioregistry/analysis/bioregistry_diff.py
src/bioregistry/analysis/paper_ranking.py
src/bioregistry/analysis/title_tfidf.py
src/bioregistry/cli.py
src/bioregistry/curation/suggest_author_curation.py
src/bioregistry/external/ols/__init__.py
src/bioregistry/external/wikidata/__init__.py
src/bioregistry/gh/new_prefix.py
src/bioregistry/schema/struct.py
src/bioregistry/version.py
tests/test_data.py
cthoyt added a commit that referenced this issue Nov 4, 2024
Related to #1201, the Bioregistry codebase already started to get unruly
when I wasn't able to give consistent code quality reviews. Moving
towards making all files being strictly typed is the next big step
towards making it more sustainable. This is a first step towards that.
It focuses on making sure that students might touch has the highest
amount of checks on it
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