Update Data #1136
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name: Update Data | |
on: | |
workflow_dispatch: | |
schedule: | |
- cron: "0 0 * * *" | |
jobs: | |
build: | |
runs-on: ubuntu-latest | |
if: ${{ github.event_name != 'schedule' || github.repository == 'biopragmatics/bioregistry' }} | |
steps: | |
- uses: actions/checkout@master | |
with: | |
persist-credentials: false # otherwise, the token used is the GITHUB_TOKEN, instead of your personal token | |
fetch-depth: 0 # otherwise, you will failed to push refs to dest repo | |
- uses: actions/setup-python@v2 | |
with: | |
python-version: 3.9 | |
- name: Install dependencies | |
run: | | |
pip install "tox<4.0.0" | |
############ | |
# UPDATE # | |
############ | |
- name: Create local changes | |
id: update | |
run: | | |
tox -e update | |
env: | |
BIOPORTAL_API_KEY: ${{ secrets.BIOPORTAL_API_KEY }} | |
ECOPORTAL_API_KEY: ${{ secrets.ECOPORTAL_API_KEY }} | |
AGROPORTAL_API_KEY: ${{ secrets.AGROPORTAL_API_KEY }} | |
FAIRSHARING_LOGIN: ${{ secrets.FAIRSHARING_LOGIN }} | |
FAIRSHARING_PASSWORD: ${{ secrets.FAIRSHARING_PASSWORD }} | |
NDEX_USERNAME: ${{ secrets.NDEX_USERNAME }} | |
NDEX_PASSWORD: ${{ secrets.NDEX_PASSWORD }} | |
- name: Check environment | |
run: echo ${{ steps.update.outputs.BR_UPDATED }} | |
- name: Commit files | |
if: steps.update.outputs.BR_UPDATED == 'true' | |
run: | | |
git config --local user.email "[email protected]" | |
git config --local user.name "GitHub Action" | |
git commit --all -m "📮 Automatically update" | |
# Not sure if this should be here or not - what if it pushes something bad that needs to be reverted? | |
# - name: Push changes | |
# if: steps.update.outputs.BR_UPDATED == 'true' | |
# uses: ad-m/github-push-action@master | |
# with: | |
# github_token: ${{ secrets.GITHUB_TOKEN }} | |
# branch: ${{ github.ref }} | |
# tags: true | |
- name: Run tests, don't push to PyPI unless passing | |
if: steps.update.outputs.BR_UPDATED == 'true' | |
run: | | |
tox -e py | |
################## | |
# MARK RELEASE # | |
################## | |
- name: bump2version release | |
if: steps.update.outputs.BR_UPDATED == 'true' | |
run: | | |
tox -e bumpversion-release | |
########## | |
# PyPI # | |
########## | |
- name: Release to PyPI | |
if: steps.update.outputs.BR_UPDATED == 'true' | |
run: | | |
tox -e release | |
env: | |
TWINE_USERNAME: ${{ secrets.PYPI_USERNAME }} | |
TWINE_PASSWORD: ${{ secrets.PYPI_PASSWORD }} | |
- name: bump2version patch | |
if: steps.update.outputs.BR_UPDATED == 'true' | |
run: | | |
tox -e bumpversion patch | |
- name: Push changes | |
if: steps.update.outputs.BR_UPDATED == 'true' | |
uses: ad-m/github-push-action@master | |
with: | |
github_token: ${{ secrets.GITHUB_TOKEN }} | |
branch: ${{ github.ref }} | |
tags: true | |
- name: Sleep to avoid race conditions | |
if: steps.update.outputs.BR_UPDATED == 'true' | |
run: | | |
sleep 300 | |
############ | |
# DOCKER # | |
############ | |
- name: Set up QEMU | |
if: steps.update.outputs.BR_UPDATED == 'true' | |
uses: docker/setup-qemu-action@v1 | |
- name: Set up Docker Buildx | |
if: steps.update.outputs.BR_UPDATED == 'true' | |
uses: docker/setup-buildx-action@v1 | |
- name: Login to DockerHub | |
if: steps.update.outputs.BR_UPDATED == 'true' | |
uses: docker/login-action@v1 | |
with: | |
username: ${{ secrets.DOCKERHUB_USERNAME }} | |
password: ${{ secrets.DOCKERHUB_TOKEN }} | |
- name: Build and push | |
if: steps.update.outputs.BR_UPDATED == 'true' | |
id: docker_build | |
uses: docker/build-push-action@v2 | |
with: | |
push: true | |
# See: https://github.com/docker/build-push-action/blob/master/docs/advanced/multi-platform.md | |
platforms: linux/amd64,linux/arm64 | |
tags: biopragmatics/bioregistry:latest | |
- name: Image digest | |
if: steps.update.outputs.BR_UPDATED == 'true' | |
run: echo ${{ steps.docker_build.outputs.digest }} |