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Signed-off-by: Alex Pickering <[email protected]>
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alexvpickering committed Oct 23, 2023
1 parent e41a05a commit 8869131
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2 changes: 1 addition & 1 deletion pipeline-runner/Dockerfile
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Expand Up @@ -69,7 +69,7 @@ RUN echo ".libPaths(c('$RENV_LIB', .libPaths()))" >> $(R RHOME)/etc/Rprofile.sit
cat sysdeps_run.txt | xargs ./install_debian_packages.sh && \
rm -rf *

# install umap-learn for RunUMAP
# install python packages in virtualenv
ENV WORKON_HOME=/src/.virtualenvs
RUN R -q -e "reticulate::virtualenv_create('r-reticulate')" && \
R -q -e "reticulate::virtualenv_install('r-reticulate', c('geosketch==1.2', 'scanorama==1.7.3'), pip_options='--no-cache-dir')"
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