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Scdrake spatial

Scdrake spatial #71

Workflow file for this run

name: Docker Image CI
on:
push:
branches: [ 'main' ]
pull_request:
branches: [ 'main' ]
release:
types: [published]
env:
IMAGE: jirinovo/scdrake
TEST_TAG: test
jobs:
docker-build-test-push:
runs-on: ubuntu-latest
steps:
- name: Checkout
uses: actions/checkout@v4
- name: Get scdrake package version from DESCRIPTION
run: |
pkg_version=$(grep -P '^Version: \d+\.\d+\.\d+$' DESCRIPTION | cut -d' ' -f2)
echo "pkg_version=$pkg_version" >> $GITHUB_ENV
echo "scdrake package version: $pkg_version"
- name: Check that tag matches package version in DESCRIPTION
if: github.event_name == 'release'
run: |
echo "pkg_version: $pkg_version"
test -n "$pkg_version" || (echo "'Version:' not found in DESCRIPTION" && false)
test "v$pkg_version" == "${{ github.event.release.tag_name }}" \
|| (echo "'Version: $pkg_version' in DESCRIPTION does not match current git tag ('${{ github.event.release.tag_name }}')" && false)
- name: Set up QEMU
uses: docker/setup-qemu-action@v3
- name: Set up Docker Buildx
uses: docker/setup-buildx-action@v3
- name: Login to Docker Hub
uses: docker/login-action@v3
with:
username: ${{ secrets.DOCKERHUB_USERNAME }}
password: ${{ secrets.DOCKERHUB_TOKEN }}
- name: Free disk space
run: |
sudo rm -rf \
/usr/share/dotnet /usr/local/lib/android /opt/ghc \
/usr/local/share/powershell /usr/share/swift /usr/local/.ghcup \
/usr/lib/jvm || true
# - name: Free Disk Space (Ubuntu)
# uses: jlumbroso/free-disk-space@main
# with:
# tool-cache: false
# android: true
# dotnet: true
# haskell: true
# large-packages: false
# docker-images: false
# swap-storage: true
- name: Build and export test image
uses: docker/build-push-action@v5
with:
context: .
build-args: |
"SCDRAKE_VERSION=${{ env.pkg_version }}"
load: true
tags: ${{ env.IMAGE }}:${{ env.TEST_TAG }}
cache-from: type=gha
cache-to: type=gha,mode=min
- name: Run test image
run: |
docker run -d \
--name scdrake_test \
-v $(pwd):/home/rstudio/scdrake_source \
-e USERID=$(id -u) \
-e GROUPID=$(id -g) \
${{ env.IMAGE }}:${{ env.TEST_TAG }}
- name: Render README.md
run: |
docker exec -w /home/rstudio/scdrake_source scdrake_test \
Rscript -e 'rmarkdown::render("README.Rmd")'
set +e
git diff --exit-code README.md
exit_code=$?
set -e
# If exit code is > 0, then there are changes and README.md was not commited
test $exit_code -eq 0 || (echo "README.Rmd has changed, but an updated version of README.md was not included in this commit" && false)
- name: Test image
run: |
docker exec -w /home/rstudio/scdrake_source scdrake_test \
r --interactive -L /usr/local/lib/R/site-library -t dev/run_tests.R \
--no-test-pipeline \
--output-dir /home/rstudio/scdrake_test_summary
- name: Copy test results
if: always()
run: |
sudo docker cp scdrake_test:/home/rstudio/scdrake_test_summary /
- name: Upload test results
if: always()
uses: actions/upload-artifact@v3
with:
name: scdrake_test_summary
path: /scdrake_test_summary/
- name: Docker meta
id: meta
uses: docker/metadata-action@v5
with:
images: ${{ env.IMAGE }}
tags: |
type=raw,value=latest,enable=${{ github.ref == format('refs/heads/{0}', 'main') }}
type=semver,pattern={{version}}
- name: Build and push image to Docker Hub
uses: docker/build-push-action@v5
with:
context: .
build-args: |
"SCDRAKE_VERSION=${{ env.pkg_version }}"
platforms: linux/amd64
push: ${{ github.event_name != 'pull_request' }}
tags: ${{ steps.meta.outputs.tags }}
labels: ${{ steps.meta.outputs.labels }}
cache-from: type=gha
cache-to: type=gha,mode=min
- name: Remove devel mode from _pkgdown.yml
if: github.event_name == 'release'
run: |
docker exec -w /home/rstudio/scdrake_source scdrake_test \
bash -c 'sed -i "/development:/d" _pkgdown.yml; sed -i "/mode: devel/d" _pkgdown.yml'
- name: Build pkgdown site
run: |
docker exec -w /home/rstudio/scdrake_source scdrake_test \
Rscript -e "pkgdown::build_site_github_pages(new_process = FALSE, install = FALSE)"
- name: Deploy to GitHub pages (stable docs)
if: github.event_name == 'release'
uses: JamesIves/[email protected]
with:
clean: false
branch: gh-pages
folder: docs
- name: Deploy to GitHub pages (devel docs)
if: github.event_name == 'push'
uses: JamesIves/[email protected]
with:
clean: false
branch: gh-pages
folder: docs/dev
target-folder: dev
- name: Rollback release
if: github.event_name == 'release' && failure()
uses: author/action-rollback@stable
with:
tag: ${{ github.event.release.tag_name }}
env:
GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}