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Update augur to 26.1.0 #52079

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Nov 13, 2024
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17 changes: 10 additions & 7 deletions recipes/augur/meta.yaml
Original file line number Diff line number Diff line change
@@ -1,26 +1,27 @@
{% set version = "26.0.0" %}
{% set version = "26.1.0" %}

package:
name: augur
version: {{ version }}

source:
url: https://github.com/nextstrain/augur/releases/download/{{ version }}/nextstrain_augur-{{ version }}.tar.gz
sha256: 0040d881eca4d695b75ba87c07a6c7abbdd13cc3e200606d77b38b875348cb07
sha256: 74159e9a663ad4f1171b1800dd345dd94777a37dcc74abc754351626f75668c2

build:
number: 0
noarch: python
entry_points:
- augur = augur.__main__:main
script: "{{ PYTHON }} -m pip install . --no-deps --ignore-installed -vv"
script: "{{ PYTHON }} -m pip install . --no-deps --no-build-isolation --no-cache-dir -vvv"
run_exports:
- {{ pin_subpackage('augur', max_pin='x') }}

requirements:
host:
- python >=3.8
- pip
- setuptools
run:
- python >=3.8
- bcbio-gff >=0.7.1,<0.8
Expand All @@ -38,7 +39,6 @@ requirements:
- scipy >=1.0.0,<2
- treetime >=0.11.2,<0.12
- xopen[zstd] >=1.7.0,<3

- fasttree
- iqtree
- mafft
Expand All @@ -52,15 +52,18 @@ test:
- augur --help

about:
home: https://github.com/nextstrain/augur
license: AGPL-3.0-only
summary: 'Process pathogen genome data for the Nextstrain platform'
home: "https://github.com/nextstrain/augur"
license: "AGPL-3.0-only"
summary: 'Process pathogen genome data for the Nextstrain platform.'
license_family: AGPL
license_file: LICENSE.txt
dev_url: "https://github.com/nextstrain/augur"
doc_url: "https://docs.nextstrain.org/projects/augur"

extra:
identifiers:
- doi:10.21105/joss.02906
- biotools:Augur
recipe-maintainers:
- nextstrain-bot
- huddlej
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