Update meta.yaml

recipes/phabox/meta.yaml

@@ -20,25 +20,284 @@ build:
 
 requirements:
   host:
-    - pip
     - python >=3.8
     - setuptools
   run:
-    - python >=3.8
-    - biopython >=1.84
-    - datasets >=3
-    - kcounter >=0.1.1
-    - fasttree >=2.1.11
-    - mafft >=7.525
-    - networkx >=3.4
-    - numpy >=1.26
-    - pandas >=2
-    - prodigal-gv >=2.11.0
-    - pyarrow >=16
-    - pytorch >=2.4
-    - scipy >=1.14
-    - seaborn-base >=0.13.2
-    - transformers >=4
+  - _libgcc_mutex =0.1=conda_forge
+  - _openmp_mutex =4.5=2_kmp_llvm
+  - accelerate =1.0.1=pyhd8ed1ab_0
+  - aiohappyeyeballs =2.4.3=pyhd8ed1ab_0
+  - aiohttp =3.10.10=py310h89163eb_0
+  - aiosignal =1.3.1=pyhd8ed1ab_0
+  - async-timeout =4.0.3=pyhd8ed1ab_0
+  - attrs =24.2.0=pyh71513ae_0
+  - aws-c-auth =0.7.22=h96bc93b_2
+  - aws-c-cal =0.6.14=h88a6e22_1
+  - aws-c-common =0.9.19=h4ab18f5_0
+  - aws-c-compression =0.2.18=h83b837d_6
+  - aws-c-event-stream =0.4.2=ha47c788_12
+  - aws-c-http =0.8.1=h29d6fba_17
+  - aws-c-io =0.14.8=h21d4f22_5
+  - aws-c-mqtt =0.10.4=h759edc4_4
+  - aws-c-s3 =0.5.9=h594631b_3
+  - aws-c-sdkutils =0.1.16=h83b837d_2
+  - aws-checksums =0.1.18=h83b837d_6
+  - aws-crt-cpp =0.26.9=he3a8b3b_0
+  - aws-sdk-cpp =1.11.329=hba8bd5f_3
+  - azure-core-cpp =1.13.0=h935415a_0
+  - azure-identity-cpp =1.9.0=hd126650_0
+  - azure-storage-blobs-cpp =12.13.0=h1d30c4a_0
+  - azure-storage-common-cpp =12.8.0=ha3822c6_0
+  - azure-storage-files-datalake-cpp =12.12.0=h0f25b8a_0
+  - biopython =1.84=py310hc51659f_0
+  - blast =2.16.0=hc155240_2
+  - brotli =1.1.0=hb9d3cd8_2
+  - brotli-bin =1.1.0=hb9d3cd8_2
+  - brotli-python =1.1.0=py310hf71b8c6_2
+  - bzip2 =1.0.8=h4bc722e_7
+  - c-ares =1.32.3=h4bc722e_0
+  - ca-certificates =2024.8.30=hbcca054_0
+  - certifi =2024.8.30=pyhd8ed1ab_0
+  - cffi =1.17.1=py310h8deb56e_0
+  - charset-normalizer =3.4.0=pyhd8ed1ab_0
+  - click =8.1.7=unix_pyh707e725_0
+  - colorama =0.4.6=pyhd8ed1ab_0
+  - contourpy =1.3.0=py310h3788b33_2
+  - cpython =3.10.15=py310hd8ed1ab_2
+  - cuda-version =11.8=h70ddcb2_3
+  - cudatoolkit =11.8.0=h4ba93d1_13
+  - cudnn =8.9.7.29=hbc23b4c_3
+  - curl =8.9.1=hdbd6064_0
+  - cycler =0.12.1=pyhd8ed1ab_0
+  - dataclasses =0.8=pyhc8e2a94_3
+  - datasets =3.0.2=pyhd8ed1ab_0
+  - dbus =1.13.18=hb2f20db_0
+  - diamond =0.9.14=h2e03b76_4
+  - dill =0.3.8=pyhd8ed1ab_0
+  - entrez-direct =22.4=he881be0_0
+  - expat =2.6.3=h5888daf_0
+  - fasttree =2.1.11=h031d066_4
+  - filelock =3.16.1=pyhd8ed1ab_0
+  - fontconfig =2.14.1=h55d465d_3
+  - fonttools =4.54.1=py310h89163eb_1
+  - freetype =2.12.1=h267a509_2
+  - frozenlist =1.5.0=py310ha75aee5_0
+  - fsspec =2024.9.0=pyhff2d567_0
+  - gawk =5.3.1=hcd3d067_0
+  - gettext =0.22.5=he02047a_3
+  - gettext-tools =0.22.5=he02047a_3
+  - gflags =2.2.2=h5888daf_1005
+  - glib =2.80.2=hf974151_0
+  - glib-tools =2.80.2=hb6ce0ca_0
+  - glog =0.7.1=hbabe93e_0
+  - gmp =6.3.0=hac33072_2
+  - gmpy2 =2.1.5=py310he8512ff_2
+  - gst-plugins-base =1.14.1=h6a678d5_1
+  - gstreamer =1.14.1=h5eee18b_1
+  - h2 =4.1.0=pyhd8ed1ab_0
+  - hpack =4.0.0=pyh9f0ad1d_0
+  - huggingface_hub =0.26.1=pyh0610db2_0
+  - hyperframe =6.0.1=pyhd8ed1ab_0
+  - icu =73.2=h59595ed_0
+  - idna =3.10=pyhd8ed1ab_0
+  - jinja2 =3.1.4=pyhd8ed1ab_0
+  - joblib =1.4.2=pyhd8ed1ab_0
+  - jpeg =9e=h0b41bf4_3
+  - kcounter =0.1.1=py310h4b81fae_4
+  - kernel-headers_linux-64=3.10.0=he073ed8_17
+  - keyutils =1.6.1=h166bdaf_0
+  - kiwisolver =1.4.7=py310h3788b33_0
+  - krb5 =1.20.1=h81ceb04_0
+  - lcms2 =2.12=hddcbb42_0
+  - ld_impl_linux-64 =2.43=h712a8e2_2
+  - lerc =3.0=h9c3ff4c_0
+  - libabseil =20240116.2=cxx17_he02047a_1
+  - libarrow =16.1.0=hcb6531f_6_cpu
+  - libarrow-acero =16.1.0=hac33072_6_cpu
+  - libarrow-dataset =16.1.0=hac33072_6_cpu
+  - libarrow-substrait =16.1.0=h7e0c224_6_cpu
+  - libasprintf =0.22.5=he8f35ee_3
+  - libasprintf-devel =0.22.5=he8f35ee_3
+  - libblas =3.9.0=25_linux64_openblas
+  - libbrotlicommon =1.1.0=hb9d3cd8_2
+  - libbrotlidec =1.1.0=hb9d3cd8_2
+  - libbrotlienc =1.1.0=hb9d3cd8_2
+  - libcblas =3.9.0=25_linux64_openblas
+  - libclang =14.0.6=default_h7634d5b_1
+  - libclang13 =14.0.6=default_h9986a30_1
+  - libcrc32c =1.1.2=h9c3ff4c_0
+  - libcups =2.3.3=h36d4200_3
+  - libcurl =8.9.1=h251f7ec_0
+  - libdeflate =1.10=h7f98852_0
+  - libedit =3.1.20191231=he28a2e2_2
+  - libev =4.33=hd590300_2
+  - libevent =2.1.12=hf998b51_1
+  - libexpat =2.6.3=h5888daf_0
+  - libffi =3.4.2=h7f98852_5
+  - libgcc =14.2.0=h77fa898_1
+  - libgcc-ng =14.2.0=h69a702a_1
+  - libgettextpo =0.22.5=he02047a_3
+  - libgettextpo-devel =0.22.5=he02047a_3
+  - libgfortran =14.2.0=h69a702a_1
+  - libgfortran-ng =14.2.0=h69a702a_1
+  - libgfortran5 =14.2.0=hd5240d6_1
+  - libglib =2.80.2=hf974151_0
+  - libgomp =14.2.0=h77fa898_1
+  - libgoogle-cloud =2.24.0=h2736e30_0
+  - libgoogle-cloud-storage =2.24.0=h3d9a0c8_0
+  - libgrpc =1.62.2=h15f2491_0
+  - libhwloc =2.11.1=default_hecaa2ac_1000
+  - libiconv =1.17=hd590300_2
+  - libidn2 =2.3.7=hd590300_0
+  - liblapack =3.9.0=25_linux64_openblas
+  - libllvm14 =14.0.6=hcd5def8_4
+  - libmagma =2.8.0=hfdb99dd_0
+  - libmagma_sparse =2.8.0=h9ddd185_0
+  - libmlir14 =14.0.6=he0ac6c6_0
+  - libnghttp2 =1.58.0=h47da74e_1
+  - libnsl =2.0.1=hd590300_0
+  - libopenblas =0.3.28=pthreads_h94d23a6_0
+  - libparquet =16.1.0=h6a7eafb_6_cpu
+  - libpng =1.6.43=h2797004_0
+  - libpq =12.17=hdbd6064_0
+  - libprotobuf =4.25.3=h08a7969_0
+  - libre2-11 =2023.09.01=h5a48ba9_2
+  - libsqlite =3.46.0=hde9e2c9_0
+  - libssh2 =1.11.0=h0841786_0
+  - libstdcxx =14.2.0=hc0a3c3a_1
+  - libstdcxx-ng =14.2.0=h4852527_1
+  - libthrift =0.19.0=hb90f79a_1
+  - libtiff =4.3.0=h0fcbabc_4
+  - libtorch =2.4.0=cuda118_h8db9d67_301
+  - libunistring =0.9.10=h7f98852_0
+  - libutf8proc =2.8.0=h166bdaf_0
+  - libuuid =1.41.5=h5eee18b_0
+  - libuv =1.49.2=hb9d3cd8_0
+  - libwebp-base =1.4.0=hd590300_0
+  - libxcb =1.17.0=h8a09558_0
+  - libxcrypt =4.4.36=hd590300_1
+  - libxkbcommon =1.7.0=h2c5496b_1
+  - libxml2 =2.13.1=hfdd30dd_2
+  - libzlib =1.2.13=h4ab18f5_6
+  - lit =19.1.2=pyhd8ed1ab_0
+  - llvm-openmp =19.1.2=h024ca30_0
+  - lz4-c =1.9.4=hcb278e6_0
+  - mafft =7.525=h031d066_1
+  - markupsafe =3.0.2=py310h89163eb_0
+  - matplotlib =3.9.1=py310hff52083_1
+  - matplotlib-base =3.9.1=py310hf02ac8c_2
+  - mcl =22.282=pl5321h031d066_2
+  - mkl =2023.2.0=h84fe81f_50496
+  - mpc =1.3.1=h24ddda3_1
+  - mpfr =4.2.1=h90cbb55_3
+  - mpmath =1.3.0=pyhd8ed1ab_0
+  - multidict =6.1.0=py310h89163eb_1
+  - multiprocess =0.70.16=py310ha75aee5_1
+  - munkres =1.0.7=py_1
+  - mysql =5.7.20=hf484d3e_1001
+  - ncbi-vdb =3.1.1=h4ac6f70_2
+  - nccl =2.23.4.1=h03a54cd_1
+  - ncurses =6.5=he02047a_1
+  - networkx =3.4.2=pyhd8ed1ab_0
+  - numpy =1.26.4=py310hb13e2d6_0
+  - olefile =0.47=pyhd8ed1ab_0
+  - openjpeg =2.5.0=h7d73246_0
+  - openssl =3.3.2=hb9d3cd8_0
+  - orc =2.0.1=h17fec99_1
+  - packaging =24.1=pyhd8ed1ab_0
+  - pandas =2.2.3=py310h5eaa309_1
+  - patsy =0.5.6=pyhd8ed1ab_0
+  - pcre2 =10.43=hcad00b1_0
+  - perl =5.32.1=7_hd590300_perl5
+  - perl-archive-tar =2.40=pl5321hdfd78af_0
+  - perl-carp =1.38=pl5321hdfd78af_4
+  - perl-common-sense =3.75=pl5321hdfd78af_0
+  - perl-compress-raw-bzip2 =2.201=pl5321h87f3376_1
+  - perl-compress-raw-zlib =2.105=pl5321h87f3376_0
+  - perl-encode =3.19=pl5321hec16e2b_1
+  - perl-exporter =5.72=pl5321hdfd78af_2
+  - perl-exporter-tiny =1.002002=pl5321hdfd78af_0
+  - perl-extutils-makemaker =7.70=pl5321hd8ed1ab_0
+  - perl-io-compress =2.201=pl5321hdbdd923_2
+  - perl-io-zlib =1.14=pl5321hdfd78af_0
+  - perl-json =4.10=pl5321hdfd78af_1
+  - perl-json-xs =4.03=pl5321h4ac6f70_3
+  - perl-list-moreutils =0.430=pl5321hdfd78af_0
+  - perl-list-moreutils-xs =0.430=pl5321h031d066_2
+  - perl-parent =0.236=pl5321hdfd78af_2
+  - perl-pathtools =3.75=pl5321hec16e2b_3
+  - perl-scalar-list-utils =1.62=pl5321hec16e2b_1
+  - perl-types-serialiser =1.01=pl5321hdfd78af_0
+  - pillow =8.4.0=py310h07f4688_0
+  - pip =24.2=pyh8b19718_1
+  - prodigal-gv =2.11.0=he4a0461_2
+  - propcache =0.2.0=py310ha75aee5_2
+  - psutil =6.0.0=py310ha75aee5_2
+  - pthread-stubs =0.4=hb9d3cd8_1002
+  - pyarrow =16.1.0=py310h17c5347_1
+  - pyarrow-core =16.1.0=py310h6f79a3a_1_cpu
+  - pycparser =2.22=pyhd8ed1ab_0
+  - pyparsing =3.2.0=pyhd8ed1ab_1
+  - pyqt =5.15.4=py310hd8f1fbe_0
+  - pyqt5-sip =12.9.0=py310hd8f1fbe_0
+  - pysocks =1.7.1=pyha2e5f31_6
+  - python =3.10.15=he870216_1
+  - python-dateutil =2.9.0=pyhd8ed1ab_0
+  - python-tzdata =2024.2=pyhd8ed1ab_0
+  - python-xxhash =3.5.0=py310ha75aee5_1
+  - python_abi =3.10=2_cp310
+  - pytorch =2.4.0=cuda118_py310h954aa82_301
+  - pytz =2024.1=pyhd8ed1ab_0
+  - pyyaml =6.0.2=py310ha75aee5_1
+  - qhull =2020.2=h434a139_5
+  - qt-main =5.15.2=h53bd1ea_10
+  - re2 =2023.09.01=h7f4b329_2
+  - readline =8.2=h8228510_1
+  - regex =2024.9.11=py310ha75aee5_0
+  - requests =2.32.3=pyhd8ed1ab_0
+  - rpsbproc =0.5.0=h6a68c12_0
+  - s2n=1.4.15 =he19d79f_0
+  - sacremoses =0.0.53=pyhd8ed1ab_0
+  - safetensors =0.4.5=py310h505e2c1_0
+  - scipy =1.14.1=py310hfcf56fc_1
+  - seaborn =0.13.2=hd8ed1ab_2
+  - seaborn-base =0.13.2=pyhd8ed1ab_2
+  - setuptools =75.1.0=pyhd8ed1ab_0
+  - sip =6.5.1=py310h122e73d_2
+  - six =1.16.0=pyh6c4a22f_0
+  - sleef =3.7=h1b44611_0
+  - snappy =1.2.1=ha2e4443_0
+  - sqlite =3.46.0=h6d4b2fc_0
+  - statsmodels =0.14.4=py310hf462985_0
+  - sympy =1.13.3=pyh2585a3b_104
+  - sysroot_linux-64 =2.17=h4a8ded7_17
+  - tbb =2021.13.0=h84d6215_0
+  - tk =8.6.14=h39e8969_0
+  - tokenizers =0.10.3=py310hb317417_1
+  - toml =0.10.2=pyhd8ed1ab_0
+  - tornado =6.4.1=py310ha75aee5_1
+  - tqdm =4.66.5=pyhd8ed1ab_0
+  - transformers =4.11.3=pyhd8ed1ab_0
+  - triton =2.0.0=cuda112py310hb224420_4
+  - typing-extensions =4.12.2=hd8ed1ab_0
+  - typing_extensions =4.12.2=pyha770c72_0
+  - tzdata =2024b=hc8b5060_0
+  - unicodedata2 =15.1.0=py310ha75aee5_1
+  - urllib3 =2.2.3=pyhd8ed1ab_0
+  - wget =1.21.4=hda4d442_0
+  - wheel =0.44.0=pyhd8ed1ab_0
+  - xkeyboard-config =2.43=hb9d3cd8_0
+  - xorg-libx11 =1.8.10=h4f16b4b_0
+  - xorg-libxau =1.0.11=hb9d3cd8_1
+  - xorg-libxdmcp =1.1.5=hb9d3cd8_0
+  - xorg-xorgproto =2024.1=hb9d3cd8_1
+  - xxhash =0.8.2=hd590300_0
+  - xz =5.4.6=h5eee18b_1
+  - yaml =0.2.5=h7f98852_2
+  - yarl =1.15.5=py310ha75aee5_0
+  - zlib =1.2.13=h4ab18f5_6
+  - zstandard =0.23.0=py310ha39cb0e_1
+  - zstd =1.5.6=ha6fb4c9_0
 
 test:
   commands: