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Update phyloacc to 2.4.2 #51458

Merged
merged 1 commit into from
Oct 17, 2024
Merged

Update phyloacc to 2.4.2 #51458

merged 1 commit into from
Oct 17, 2024

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Update phyloacc: 2.4.12.4.2

install with bioconda Conda

Info Link or Description
Recipe recipes/phyloacc (click to view/edit other files)
Summary Bayesian estimation of substitution rate shifts in non-coding regions
Home https://phyloacc.github.io/
Releases https://github.com/phyloacc/PhyloAcc/tags
Recipe Maintainer(s) @gwct
Author @phyloacc

This pull request was automatically generated (see docs).

@BiocondaBot BiocondaBot added autobump Automatic Version Update new version labels Oct 17, 2024
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coderabbitai bot commented Oct 17, 2024

📝 Walkthrough

Walkthrough

The pull request introduces updates to the meta.yaml file for the PhyloAcc package. The version number has been incremented from 2.4.1 to 2.4.2, and the SHA256 checksum has been updated from 919203dc541c172f9e835b0568f6abd49999a24734957fec020b01161479282c to effa443400fa1ebfa43de1daf551c8344f883bcf8d048a11e64fca64243a93fe. Additionally, the build number has been reset from 2 to 0. The skip directive remains unchanged, indicating that builds for Python versions less than 3.11 should continue to be skipped. The requirements for both build and run environments have not been altered, and the test section still includes the wget requirement without any changes. The about section, which contains URLs and licensing information, also remains intact. The primary focus of the changes is on versioning, checksum updates, and the reset of the build number.

Possibly related PRs

  • Update phyloacc to 2.4.1 #51082: Updates the PhyloAcc package from version 2.4.0 to 2.4.1, directly preceding the current update to 2.4.2.
  • Update phyloacc to 2.4.0 #50992: Updates the PhyloAcc package from version 2.3.4 to 2.4.0, contributing to the versioning progression that leads to the current PR.
  • Update PhyloAcc recipe #51090: Modifies the PhyloAcc package by changing the build number and updating dependencies, relevant to the ongoing maintenance reflected in the main PR.
  • Update PhyloAcc recipe #51224: Enhances the testing framework for the PhyloAcc package, indicating related improvements and updates relevant to the changes made in the main PR.

📜 Recent review details

Configuration used: CodeRabbit UI
Review profile: CHILL

📥 Commits

Files that changed from the base of the PR and between b072084 and 7d9b5ae.

📒 Files selected for processing (1)
  • recipes/phyloacc/meta.yaml (2 hunks)
🧰 Additional context used
🔇 Additional comments (4)
recipes/phyloacc/meta.yaml (4)

2-2: Version update looks good.

The version has been correctly updated from 2.4.1 to 2.4.2, which aligns with the PR objectives.


14-14: Build number reset is correct.

The build number has been appropriately reset to 0 for the new version 2.4.2. This is the correct practice when updating to a new version of the package.


Line range hint 1-65: Overall changes look good and follow best practices.

The updates to the meta.yaml file are consistent with a standard version bump for a Conda package:

  1. The version has been incremented from 2.4.1 to 2.4.2.
  2. The SHA256 checksum has been updated accordingly.
  3. The build number has been reset to 0 for the new version.

These changes align with the PR objectives and follow best practices for package management in Conda. No unexpected modifications were found in the rest of the file.


3-3: SHA256 checksum has been updated.

The SHA256 checksum has been changed, which is expected with a new version. However, it's important to verify that this checksum corresponds to the correct source file for version 2.4.2.

To verify the checksum, you can run the following script:


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@mencian mencian merged commit a96dbb9 into master Oct 17, 2024
7 checks passed
@mencian mencian deleted the bump/phyloacc branch October 17, 2024 17:19
@coderabbitai coderabbitai bot mentioned this pull request Oct 31, 2024
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