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Update pyslow5 to 1.3.0 #51063

Merged
merged 1 commit into from
Oct 1, 2024
Merged

Update pyslow5 to 1.3.0 #51063

merged 1 commit into from
Oct 1, 2024

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@BiocondaBot BiocondaBot commented Oct 1, 2024

Update pyslow5: 1.2.01.3.0

install with bioconda Conda

Info Link or Description
Recipe recipes/pyslow5 (click to view/edit other files)
Summary slow5lib Python binding
Home https://github.com/hasindu2008/slow5lib
Releases https://pypi.org/pypi/pyslow5/json

This pull request was automatically generated (see docs).

@BiocondaBot BiocondaBot added autobump Automatic Version Update new version labels Oct 1, 2024
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coderabbitai bot commented Oct 1, 2024

📝 Walkthrough

Walkthrough

The pull request updates the meta.yaml file for the pyslow5 package, increasing the version number from 1.2.0 to 1.3.0 and updating the SHA256 checksum accordingly. The source URL for the package remains unchanged, indicating a new release that may include various enhancements or fixes.

Changes

File Change Summary
recipes/pyslow5/meta.yaml Version updated from 1.2.0 to 1.3.0; SHA256 updated from e756a33e2bca... to 2fdf091beb7e...

Possibly related PRs


📜 Recent review details

Configuration used: CodeRabbit UI
Review profile: CHILL

📥 Commits

Files that changed from the base of the PR and between 8fc154f and 4381592.

📒 Files selected for processing (1)
  • recipes/pyslow5/meta.yaml (1 hunks)
🔇 Additional comments (3)
recipes/pyslow5/meta.yaml (3)

3-3: Version update looks good.

The version has been correctly updated to 1.3.0, which is consistent with the PR objectives.

To ensure consistency, please verify that this version number matches the latest release of pyslow5 on PyPI and in the package's repository. You can use the following script:

#!/bin/bash
# Description: Verify the version number consistency
# Expected result: The version numbers should match across all sources

# Check PyPI version
echo "PyPI version:"
curl -s https://pypi.org/pypi/pyslow5/json | jq -r .info.version

# Check GitHub releases
echo "Latest GitHub release:"
curl -s https://api.github.com/repos/hasindu2008/slow5lib/releases/latest | jq -r .tag_name

echo "Version in meta.yaml:"
grep version recipes/pyslow5/meta.yaml | awk '{print $3}' | tr -d '"'

Line range hint 1-46: Overall changes look good. Consider checking dependencies.

The version update and SHA256 checksum change have been implemented correctly. The rest of the file, including build number and metadata, remains appropriately unchanged.

As a final step, it might be worth verifying if any dependencies need to be updated along with this version bump. You can check the package's release notes or changelog for any mentions of updated requirements. Additionally, you can run the following script to check for any potential dependency updates:

This script will help you identify if there are any newer versions of the dependencies available, which might be compatible with the updated pyslow5 version.

🧰 Tools
🪛 yamllint

[error] 1-1: syntax error: found character '%' that cannot start any token

(syntax)


2-2: Verify the SHA256 checksum.

The SHA256 checksum has been updated to match the new version of the package. Please ensure that this checksum is correct and matches the one provided by the package maintainers.

To verify the checksum, you can run the following command:


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@mencian mencian merged commit 24d0e07 into master Oct 1, 2024
7 checks passed
@mencian mencian deleted the bump/pyslow5 branch October 1, 2024 14:45
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