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Add recipe for consensify #50969

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Sep 27, 2024
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14 changes: 14 additions & 0 deletions recipes/consensify/build.sh
Original file line number Diff line number Diff line change
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#!/bin/bash

## change to source dir
cd "${SRC_DIR}" || exit 1
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## compile
${CXX} -c consensify_c.cpp -I./ ${CXXFLAGS}

## link
${CXX} consensify_c.o -o consensify_c -lz ${LDFLAGS}

## install
mkdir -p $PREFIX/bin
cp consensify_c ${PREFIX}/bin/consensify_c
35 changes: 35 additions & 0 deletions recipes/consensify/meta.yaml
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{% set version = "2.4.0" %}

package:
name: consensify
version: {{ version }}

source:
url: https://github.com/jlapaijmans/Consensify/archive/refs/tags/{{ version }}.tar.gz
sha256: 2b88cda2c6ad44b6fd749d86485d3f16418b189b9c8ff4d20dd19640792dac1e

build:
number: 0
run_exports:
- {{ pin_subpackage('consensify', max_pin="x") }}

requirements:
build:
- {{ compiler('cxx') }}
host:
- zlib
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run:
- zlib

test:
commands:
- consensify_c -h

about:
home: https://github.com/jlapaijmans/Consensify
license: GPL3
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license_file: LICENCE.txt
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dev_url: https://github.com/jlapaijmans/Consensify
doc_url: https://github.com/jlapaijmans/Consensify
summary: A method for generating a consensus pseudohaploid genome sequence
about: Consensify is a method for generating a consensus pseudohaploid genome sequence with greatly reduced error rates compared to standard pseudohaploidisation. The method is described in full and tested in the associated publication (Barlow et al. (2020), Genes 11:50, doi 10.3390/genes11010050).
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