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Update deeplc to 3.1.3 #50436

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Update deeplc to 3.1.3 #50436

wants to merge 13 commits into from

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@BiocondaBot BiocondaBot commented Aug 31, 2024

Update deeplc: 3.0.83.1.3

install with bioconda Conda

Info Link or Description
Recipe recipes/deeplc (click to view/edit other files)
Summary DeepLC: Retention time prediction for (modified) peptides using Deep Learning.
Home https://compomics.github.io/projects/DeepLC
Releases https://pypi.org/pypi/deeplc/json
Recipe Maintainer(s) @compomics

This pull request was automatically generated (see docs).

@BiocondaBot BiocondaBot added autobump Automatic Version Update new version labels Aug 31, 2024
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coderabbitai bot commented Oct 1, 2024

📝 Walkthrough

Walkthrough

The pull request updates the meta.yaml file for the DeepLC package from version 3.0.8 to 3.1.1, which includes a new SHA256 checksum. The Python version requirement has been increased from >=3.7 to >=3.9 for both host and run requirements. Additionally, setuptools has been added to the host requirements. The TensorFlow version constraint has been updated to >=2.15.0,<3, while the upper limit for the pandas requirement has been removed, changing it from >=0.25,<2 to >=0.25. The numpy version constraint remains unchanged at >=1.17,<2. New requirements for scikit-learn (minimum version >=1.2.0) and scipy (version range >=1.0.0,<1.14.0) have been added. The entry points for the package remain unchanged, and a new documentation URL has been provided.

Possibly related PRs

  • Update civicpy to 3.1.1 #51251: The civicpy package update includes a version change and SHA256 checksum update, similar to the changes made in the DeepLC package's meta.yaml file.
  • Update civicpy to 3.1.2 #51252: This PR also updates the civicpy package's version and SHA256 checksum, reflecting similar modifications as seen in the DeepLC package update.
  • Update ms2deepscore to 2.2.0 #51452: The ms2deepscore package update includes a version increment and SHA256 checksum update, paralleling the changes made in the DeepLC package.
  • Update ms2deepscore to 2.3.0 #51804: This PR updates the ms2deepscore package's version and SHA256 checksum, consistent with the updates made in the DeepLC package's meta.yaml.

📜 Recent review details

Configuration used: CodeRabbit UI
Review profile: CHILL

📥 Commits

Reviewing files that changed from the base of the PR and between 8eab448 and 756ab7c.

📒 Files selected for processing (1)
  • recipes/deeplc/meta.yaml (3 hunks)
🚧 Files skipped from review as they are similar to previous changes (1)
  • recipes/deeplc/meta.yaml

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@BiocondaBot BiocondaBot changed the title Update deeplc to 3.1.0 Update deeplc to 3.1.1 Oct 10, 2024
@RalfG RalfG mentioned this pull request Nov 21, 2024
@BiocondaBot BiocondaBot changed the title Update deeplc to 3.1.1 Update deeplc to 3.1.2 Nov 21, 2024
@RalfG RalfG mentioned this pull request Nov 21, 2024
@BiocondaBot BiocondaBot changed the title Update deeplc to 3.1.2 Update deeplc to 3.1.3 Nov 22, 2024
@BiocondaBot BiocondaBot deleted the bump/deeplc branch November 22, 2024 14:06
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