Update pangolin to 4.3.1

recipes/pangolin/meta.yaml

@@ -1,32 +1,34 @@
-{% set version = "4.3" %}
+{% set version = "4.3.1" %}
 
 package:
   name: pangolin
   version: {{ version }}
 
 source:
   url: https://github.com/cov-lineages/pangolin/archive/refs/tags/v{{ version }}.tar.gz
-  sha256: daf13c111799943b05bc2c8eee8deb2316e1347ca8f40f0b40d22cdbcc72e3c1
+  sha256: 79f958cfc1b3a01144b138b9ca34ab010aa4ec72499a29ea41acaa57b0bfe7c0
 
 build:
-  number: 2
+  number: 0
   noarch: python
-  script: python -m pip install --no-deps --ignore-installed .
+  script: {{ PYTHON }} -m pip install --no-deps --ignore-installed .
+  run_exports:
+    - {{ pin_subpackage('pangolin', max_pin="x") }}
 
 requirements:
   host:
     - python >=3.7
     - pip
+    - setuptools
   run:
     - python >=3.7
-    - biopython ==1.74
+    - biopython >=1.74
     - pandas >=1.0.1
-    - tabulate
     - joblib >=0.11
-    - scikit-learn <1.3.0
+    - scikit-learn >=0.23.1,<1.3.0
     - pulp >=2
     - minimap2 >=2.16
-    - snakemake-minimal >=5.13,<=7.30.1
+    - snakemake-minimal >=5.13,!=7.30.1,<8
     - gofasta
     - usher >=0.6.2
     - ucsc-fatovcf >=426

recipes/pangolin/run_test.py

@@ -2,10 +2,12 @@
 
 from pathlib import Path
 from subprocess import run, PIPE, STDOUT
+import sys
 
 import pangolin
 
 test_data = Path(pangolin.__file__).parent / 'data/reference.fasta'
 cmd = ['pangolin', str(test_data)]
 pangolin_proc = run(cmd, stdout=PIPE, stderr=STDOUT)
-assert b'Output file written to' in pangolin_proc.stdout, pangolin_proc.stdout
+print(pangolin_proc.stdout.decode(), file=sys.stderr)
+assert b'Output file written to' in pangolin_proc.stdout