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Bulk #42063

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merged 2,501 commits into from
Jul 20, 2023
Merged

Bulk #42063

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[ci skip] add build failure record for recipe recipes/bioconductor-dce
bioconda-bot committed Jul 16, 2023
commit a81ce08b3f4557c9447a96213b1bf617e6dc9500
104 changes: 104 additions & 0 deletions recipes/bioconductor-dce/build_failure.linux-64.yaml
Original file line number Diff line number Diff line change
@@ -0,0 +1,104 @@
recipe_sha: 2f35add5a06fcddea3ad5fed2038085e3157a41d6f7443aafde53bd56145e5e0 # The commit at which this recipe failed to build.
skiplist: true # Set to true to skiplist this recipe so that it will be ignored as long as its latest commit is the one given above.
log: |2-

The reported errors are:
- Encountered problems while solving:
- - nothing provides requested bioconductor-epinem >=1.24.0,<1.25.0
-

Leaving build/test directories:
Work:
/opt/conda/conda-bld/work
Test:
/opt/conda/conda-bld/test_tmp
Leaving build/test environments:
Test:
source activate /opt/conda/conda-bld/_test_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_pl
Build:
source activate /opt/conda/conda-bld/_build_env


Traceback (most recent call last):
File "/opt/conda/lib/python3.8/site-packages/boa/cli/mambabuild.py", line 141, in mamba_get_install_actions
solution = solver.solve_for_action(_specs, prefix)
File "/opt/conda/lib/python3.8/site-packages/boa/core/solver.py", line 244, in solve_for_action
t = self.solve(specs)
File "/opt/conda/lib/python3.8/site-packages/boa/core/solver.py", line 234, in solve
raise RuntimeError("Solver could not find solution." error_string)
RuntimeError: Solver could not find solution.Mamba failed to solve:
- r-purrr
- r-magrittr
- r-pcalg
- r-ggplot2
- r-harmonicmeanp
- r-ppcor
- r-reshape2
- r-tidyverse
- bioconductor-graph >=1.78.0,<1.79.0
- r-rlang
- r-naturalsort
- r-glue
- r-matrix
- r-assertthat
- r-logger
- bioconductor-mnem >=1.16.0,<1.17.0
- r-dplyr
- r-shadowtext
- bioconductor-rgraphviz >=2.44.0,<2.45.0
- r-mass
- r-igraph
- r-expm
- r-ggraph
- r-glm2
- bioconductor-edger >=3.42.0,<3.43.0
- r-metap
- r-tidygraph
- r-base 4.3.*
- bioconductor-graphite >=1.46.0,<1.47.0
- bioconductor-org.hs.eg.db >=3.17.0,<3.18.0
- bioconductor-epinem >=1.24.0,<1.25.0

with channels:
- conda-forge
- bioconda
- defaults

The reported errors are:
- Encountered problems while solving:
- - nothing provides requested bioconductor-epinem >=1.24.0,<1.25.0
-

During handling of the above exception, another exception occurred:

Traceback (most recent call last):
File "/opt/conda/bin/conda-mambabuild", line 10, in <module>
sys.exit(main())
File "/opt/conda/lib/python3.8/site-packages/boa/cli/mambabuild.py", line 256, in main
call_conda_build(action, config)
File "/opt/conda/lib/python3.8/site-packages/boa/cli/mambabuild.py", line 228, in call_conda_build
result = api.build(
File "/opt/conda/lib/python3.8/site-packages/conda_build/api.py", line 180, in build
return build_tree(
File "/opt/conda/lib/python3.8/site-packages/conda_build/build.py", line 3078, in build_tree
packages_from_this = build(metadata, stats,
File "/opt/conda/lib/python3.8/site-packages/conda_build/build.py", line 2038, in build
output_metas = expand_outputs([(m, need_source_download, need_reparse_in_env)])
File "/opt/conda/lib/python3.8/site-packages/conda_build/render.py", line 787, in expand_outputs
for (output_dict, m) in deepcopy(_m).get_output_metadata_set(permit_unsatisfiable_variants=False):
File "/opt/conda/lib/python3.8/site-packages/conda_build/metadata.py", line 2524, in get_output_metadata_set
conda_packages = finalize_outputs_pass(
File "/opt/conda/lib/python3.8/site-packages/conda_build/metadata.py", line 884, in finalize_outputs_pass
fm = finalize_metadata(
File "/opt/conda/lib/python3.8/site-packages/conda_build/render.py", line 547, in finalize_metadata
build_unsat, host_unsat = add_upstream_pins(m,
File "/opt/conda/lib/python3.8/site-packages/conda_build/render.py", line 409, in add_upstream_pins
host_deps, host_unsat, extra_run_specs_from_host = _read_upstream_pin_files(m, 'host',
File "/opt/conda/lib/python3.8/site-packages/conda_build/render.py", line 374, in _read_upstream_pin_files
deps, actions, unsat = get_env_dependencies(m, env, m.config.variant,
File "/opt/conda/lib/python3.8/site-packages/conda_build/render.py", line 131, in get_env_dependencies
actions = environ.get_install_actions(tmpdir, tuple(dependencies), env,
File "/opt/conda/lib/python3.8/site-packages/boa/cli/mambabuild.py", line 150, in mamba_get_install_actions
raise err
conda_build.exceptions.DependencyNeedsBuildingError: Unsatisfiable dependencies for platform linux-64: {MatchSpec("bioconductor-epinem[version='>=1.24.0,<1.25.0']")}
# Last 100 lines of the build log.