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Update dependencies. #16007

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merged 8 commits into from
Jun 19, 2019
Merged

Update dependencies. #16007

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b149a4d
Update dependencies.
Jun 19, 2019
4096786
Solve linting problems.
Jun 19, 2019
c84699b
Fix yaml file.
Jun 19, 2019
f060c61
Fix yaml file.
Jun 19, 2019
76e2d64
Remove space.
Jun 19, 2019
06f2af0
Python version for run.
Jun 19, 2019
fa067eb
Undo that last change.
Jun 19, 2019
184a7f8
Improving recipe dependencies.
Jun 19, 2019
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1 change: 0 additions & 1 deletion build-fail-blacklist
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Original file line number Diff line number Diff line change
Expand Up @@ -11,7 +11,6 @@ recipes/transcomb
# compilation or other errors in bulk
recipes/xxmotif
recipes/phylip
recipes/seq-seq-pan
recipes/metasnv
recipes/gqt
recipes/diamond_add_taxonomy
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13 changes: 7 additions & 6 deletions recipes/seq-seq-pan/meta.yaml
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Expand Up @@ -9,21 +9,21 @@ source:
md5: 3d2b2c835d9a7f8412551e9462202c60

build:
number: 2
skip: True # [osx or py27]
number: 3
noarch: python

requirements:
host:
- python
- python >=3

run:
- python
- python >=3
- biopython ==1.69
- blat ==35
- snakemake
- openjdk
- argparse
- mauvealigner ==1.2.0
- libgenome=1.3.1=h470a237_0
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test:
commands:
Expand All @@ -36,4 +36,5 @@ test:
about:
home: https://gitlab.com/chrjan/seq-seq-pan
license: FreeBSD
summary: seq-seq-pan is a workflow for the SEQuential alignment of SEQuences to build a PAN-genome data structure and a whole-genome-alignment.
summary: seq-seq-pan
description: seq-seq-pan is a workflow for the SEQuential alignment of SEQuences to build a PAN-genome data structure and a whole-genome-alignment.