Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Update r-basejump recipe and dependencies #15650

Merged
merged 1 commit into from
May 30, 2019
Merged

Update r-basejump recipe and dependencies #15650

merged 1 commit into from
May 30, 2019

Conversation

mjsteinbaugh
Copy link
Member

  • I have read the guidelines for bioconda recipes.
  • This PR adds a new recipe.
  • AFAIK, this recipe is directly relevant to the biological sciences (otherwise, please submit to the more general purpose conda-forge channel).
  • This PR updates an existing recipe.
  • This PR does something else (explain below).

This pull request updates r-basejump to v0.10.9. The r-freerange recipe needs to be added, as this is a new dependency for the basejump package.

@biocondabot
Copy link
Contributor

biocondabot bot commented May 30, 2019

Package(s) built on CircleCI are ready for inspection:

Arch Package Repodata
linux-64 r-basejump-0.10.9-r351_0.tar.bz2 repodata.json
linux-64 r-bioverbs-0.1.19-r351_0.tar.bz2 repodata.json
linux-64 r-brio-0.2.1-r351_0.tar.bz2 repodata.json
linux-64 r-freerange-0.1.6-r351_0.tar.bz2 repodata.json
linux-64 r-goalie-0.2.16-r351_0.tar.bz2 repodata.json
linux-64 r-syntactic-0.1.9-r351_0.tar.bz2 repodata.json
linux-64 r-transformer-0.1.11-r351_0.tar.bz2 repodata.json
osx-64 r-basejump-0.10.9-r351_0.tar.bz2 repodata.json
osx-64 r-bioverbs-0.1.19-r351_0.tar.bz2 repodata.json
osx-64 r-brio-0.2.1-r351_0.tar.bz2 repodata.json
osx-64 r-freerange-0.1.6-r351_0.tar.bz2 repodata.json
osx-64 r-goalie-0.2.16-r351_0.tar.bz2 repodata.json
osx-64 r-syntactic-0.1.9-r351_0.tar.bz2 repodata.json
osx-64 r-transformer-0.1.11-r351_0.tar.bz2 repodata.json

You may alsu use conda to install these:

  • For packages in linux-64:
    conda install -c https://59479-42372094-gh.circle-artifacts.com/0/tmp/artifacts/packages <package name>
    
  • For packages in osx-64:
    conda install -c https://59480-42372094-gh.circle-artifacts.com/0/tmp/artifacts/packages <package name>
    

Docker image(s) built:

Package Tag Install with docker
r-basejump 0.10.9--r351_0
showcurl "https://59479-42372094-gh.circle-artifacts.com/0/tmp/artifacts/images/r-basejump%3A0.10.9--r351_0.tar.gz" | gzip -dc | docker load
r-bioverbs 0.1.19--r351_0
showcurl "https://59479-42372094-gh.circle-artifacts.com/0/tmp/artifacts/images/r-bioverbs%3A0.1.19--r351_0.tar.gz" | gzip -dc | docker load
r-brio 0.2.1--r351_0
showcurl "https://59479-42372094-gh.circle-artifacts.com/0/tmp/artifacts/images/r-brio%3A0.2.1--r351_0.tar.gz" | gzip -dc | docker load
r-freerange 0.1.6--r351_0
showcurl "https://59479-42372094-gh.circle-artifacts.com/0/tmp/artifacts/images/r-freerange%3A0.1.6--r351_0.tar.gz" | gzip -dc | docker load
r-goalie 0.2.16--r351_0
showcurl "https://59479-42372094-gh.circle-artifacts.com/0/tmp/artifacts/images/r-goalie%3A0.2.16--r351_0.tar.gz" | gzip -dc | docker load
r-syntactic 0.1.9--r351_0
showcurl "https://59479-42372094-gh.circle-artifacts.com/0/tmp/artifacts/images/r-syntactic%3A0.1.9--r351_0.tar.gz" | gzip -dc | docker load
r-transformer 0.1.11--r351_0
showcurl "https://59479-42372094-gh.circle-artifacts.com/0/tmp/artifacts/images/r-transformer%3A0.1.11--r351_0.tar.gz" | gzip -dc | docker load

@bgruening bgruening merged commit 6b47047 into master May 30, 2019
@bgruening
Copy link
Member

thanks @mjsteinbaugh!

@bgruening bgruening deleted the r-basejump branch May 30, 2019 09:26
kpalin pushed a commit to kpalin/bioconda-recipes that referenced this pull request Aug 7, 2019
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
None yet
Projects
None yet
Development

Successfully merging this pull request may close these issues.

2 participants