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Pin compatible numpy for older HTSEQ versions #12490

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Dec 5, 2018
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7 changes: 5 additions & 2 deletions recipes/htseq/0.6.1.post1/meta.yaml
Original file line number Diff line number Diff line change
Expand Up @@ -8,18 +8,21 @@ source:

build:
preserve_egg_dir: True
number: 2
number: 3
skip: True # [not py27]

requirements:
build:
- {{ compiler('c') }}

host:
- python
- setuptools
- numpy

run:
- python
- numpy
- {{ pin_compatible('numpy') }}
- matplotlib
- pysam

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2 changes: 2 additions & 0 deletions recipes/htseq/0.6.1/meta.yaml
Original file line number Diff line number Diff line change
Expand Up @@ -12,6 +12,8 @@ package:
version: 0.6.1

requirements:
build:
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- {{ compiler('c') }}
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host:
- python
- cython
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7 changes: 5 additions & 2 deletions recipes/htseq/0.7.2/meta.yaml
Original file line number Diff line number Diff line change
Expand Up @@ -7,9 +7,12 @@ source:
sha256: b9da6d6a9004e8e05a40ecf08f74f765ec0e0be0e835e82205a117aba2ce375b

build:
number: 1
number: 2

requirements:
build:
- {{ compiler('c') }}

host:
- python
- setuptools
Expand All @@ -19,7 +22,7 @@ requirements:

run:
- python
- numpy
- {{ pin_compatible('numpy') }}
- matplotlib
- pysam >=0.9.0

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3 changes: 3 additions & 0 deletions recipes/htseq/0.9.1/build.sh
Original file line number Diff line number Diff line change
@@ -0,0 +1,3 @@
#!/bin/bash

$PYTHON setup.py build install
46 changes: 46 additions & 0 deletions recipes/htseq/0.9.1/meta.yaml
Original file line number Diff line number Diff line change
@@ -0,0 +1,46 @@
package:
name: htseq
version: "0.9.1"

source:
url: https://pypi.python.org/packages/fd/94/b7c8c1dcb7a3c3dcbde66b8d29583df4fa0059d88cc3592f62d15ef539a2/HTSeq-0.9.1.tar.gz
md5: fc71e021bf284a68f5ac7533a57641ac

build:
number: 2

requirements:
build:
- {{ compiler('c') }}

host:
- python
- setuptools
- cython
- numpy
- pysam >=0.9.0
- swig >=3.0.8

run:
- python
- {{ pin_compatible('numpy') }}
- matplotlib >=1.4
- pysam >=0.9.0

test:
# Python imports
imports:
- HTSeq._HTSeq_internal
- HTSeq.StepVector
- HTSeq._version
- HTSeq.scripts.count
- HTSeq.scripts.qa

commands:
- htseq-count -h
- htseq-qa -h

about:
home: https://github.com/simon-anders/htseq
license: GPL-3.0
summary: 'HTSeq is a Python library to facilitate processing and analysis of data from high-throughput sequencing (HTS) experiments.'