Recipe for sparcc

recipes/sparcc/build.sh

@@ -0,0 +1,6 @@
+#!/bin/bash
+
+cp *.py $PREFIX/bin
+for script in SparCC.py PseudoPvals.py MakeBootstraps.py ; do
+  chmod a+x $PREFIX/bin/$script
+done

recipes/sparcc/meta.yaml

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+{% set name = "SparCC" %}
+{% set version = "0.1.0" %}
+{% set commit = "3aff6141c3f1" %}
+{% set sha256 = "00f00acb700de381d79d9d4d244f9834eb7b223780b3d018533d0ef2c853d63e" %}
+
+package:
+  name: {{ name|lower }}
+  version: {{ version }}
+
+source:
+  url: https://bitbucket.org/yonatanf/sparcc/get/{{ commit }}.zip
+  sha256: {{ sha256 }}
+  patches:
+   - pseudopvals.patch  # https://bitbucket.org/yonatanf/sparcc/pull-requests/2/add-line-for-pseudopvalspy/diff
+
+build:
+  noarch: python
+  number: 0
+
+requirements:
+  run:
+    - python <3
+    - pandas
+    - numpy
+    - scipy
+
+test:
+  commands:
+    - SparCC.py --help |grep SparCC
+    - PseudoPvals.py --help |grep PseudoPvals
+    - MakeBootstraps.py --help |grep MakeBootstraps
+
+about:
+  home: https://bitbucket.org/yonatanf/sparcc
+  license: MIT
+  license_file: readme.rst
+  summary: 'SparCC is a python module for computing correlations in compositional data (16S, metagenomics, etc).'
+extra:
+  identifiers:
+    - doi:10.1371/journal.pcbi.1002687

recipes/sparcc/pseudopvals.patch

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+--- PseudoPvals.py.orig	2018-11-23 06:13:47.531461000 +0000
++++ PseudoPvals.py	2018-11-23 06:13:56.611567000 +0000
+@@ -1,3 +1,4 @@
++#!/usr/bin/env python
+ '''
+ Created on Apr 8, 2013
+