Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Update deblur to 1.1.0 #11489

Closed
wants to merge 4 commits into from
Closed

Update deblur to 1.1.0 #11489

Show file tree
Hide file tree
Changes from all commits
Commits
Show all changes
4 commits
Select commit Hold shift + click to select a range
400f0b9
Updating bioconductor packages
epruesse Oct 20, 2018
05ab714
Merge branch 'master' of github.com:epruesse/bioconda-recipes
epruesse Oct 22, 2018
c3990f4
Merge branch 'master' of github.com:bioconda/bioconda-recipes
epruesse Oct 23, 2018
21861c2
Update deblur to 1.1.0
epruesse Oct 23, 2018
File filter

Filter by extension

Filter by extension
Conversations
Failed to load comments.
Loading
Jump to
Jump to file
Failed to load files.
Loading
Diff view
Diff view
6 changes: 3 additions & 3 deletions recipes/bioconductor-absseq/meta.yaml
View file
Open in desktop
Original file line number Diff line number Diff line change
@@ -1,4 +1,4 @@
{% set version = "1.32.0" %}
{% set version = "1.32.3" %}
{% set name = "ABSSeq" %}
{% set bioc = "3.6" %}

Expand All @@ -9,9 +9,9 @@ source:
url:
- 'http://bioconductor.org/packages/{{ bioc }}/bioc/src/contrib/{{ name }}_{{ version }}.tar.gz'
- 'https://depot.galaxyproject.org/software/{{ name }}/{{ name }}_{{ version }}_src_all.tar.gz'
sha256: 9467de188893affa2ea59769a52f906ab93a7f2e8d6c1d0b628d42398d8254ee
sha256: e6fc3acf820feaabaef7d9932072861ee9abebe4f9dfa440f82e5a226eb2ec16
build:
number: 1
number: 0
rpaths:
- lib/R/lib/
- lib/
Expand Down
6 changes: 3 additions & 3 deletions recipes/bioconductor-annotate/meta.yaml
View file
Open in desktop
Original file line number Diff line number Diff line change
@@ -1,4 +1,4 @@
{% set version = "1.56.0" %}
{% set version = "1.56.2" %}
{% set name = "annotate" %}
{% set bioc = "3.6" %}

Expand All @@ -9,9 +9,9 @@ source:
url:
- 'http://bioconductor.org/packages/{{ bioc }}/bioc/src/contrib/{{ name }}_{{ version }}.tar.gz'
- 'https://depot.galaxyproject.org/software/{{ name }}/{{ name }}_{{ version }}_src_all.tar.gz'
sha256: 80a22ce4fd2240e70f24b187cd03aff3a47fa26b695c85928e897729f6b89972
sha256: 82b8c0d77dfa9d59e9a50b4564e70b53e7108340e9ce206d093021a1c34c6f79
build:
number: 1
number: 0
rpaths:
- lib/R/lib/
- lib/
Expand Down
6 changes: 3 additions & 3 deletions recipes/bioconductor-annotationhubdata/meta.yaml
View file
Open in desktop
Original file line number Diff line number Diff line change
@@ -1,4 +1,4 @@
{% set version = "1.8.0" %}
{% set version = "1.8.1" %}
{% set name = "AnnotationHubData" %}
{% set bioc = "3.6" %}

Expand All @@ -10,9 +10,9 @@ source:
- 'http://bioconductor.org/packages/{{ bioc }}/bioc/src/contrib/{{ name }}_{{ version }}.tar.gz'
- 'https://bioarchive.galaxyproject.org/{{ name }}_{{ version }}.tar.gz'
- 'https://depot.galaxyproject.org/software/bioconductor-{{ name|lower }}/bioconductor-{{ name|lower }}_{{ version }}_src_all.tar.gz'
sha256: 27c56de635b2d3e91771bbf9669e6bc6ae9e5a5b7b4cd23ee3b2b82d148a4adb
sha256: e521bfc2071f6de2a861e114bd525d82c638ca104fbcaac63279d9fe35d7fb22
build:
number: 1
number: 0
rpaths:
- lib/R/lib/
- lib/
Expand Down
6 changes: 3 additions & 3 deletions recipes/bioconductor-atacseqqc/meta.yaml
View file
Open in desktop
Original file line number Diff line number Diff line change
@@ -1,4 +1,4 @@
{% set version = "1.2.0" %}
{% set version = "1.2.10" %}
{% set name = "ATACseqQC" %}
{% set bioc = "3.6" %}

Expand All @@ -9,9 +9,9 @@ source:
url:
- 'http://bioconductor.org/packages/{{ bioc }}/bioc/src/contrib/{{ name }}_{{ version }}.tar.gz'
- 'https://depot.galaxyproject.org/software/{{ name }}/{{ name }}_{{ version }}_src_all.tar.gz'
sha256: 5d8e3f4afc4c27e4dc0bff1247f8162963b80a1a487dcd591f718a671c7d1654
sha256: a86215229612d1ccc6181d4a55ebeb52fc976b66c6d7bd6b9693656155423238
build:
number: 1
number: 0
rpaths:
- lib/R/lib/
- lib/
Expand Down
6 changes: 3 additions & 3 deletions recipes/bioconductor-beachmat/meta.yaml
View file
Open in desktop
Original file line number Diff line number Diff line change
@@ -1,4 +1,4 @@
{% set version = "1.0.1" %}
{% set version = "1.0.2" %}
{% set name = "beachmat" %}
{% set bioc = "3.6" %}

Expand All @@ -9,9 +9,9 @@ source:
url:
- 'http://bioconductor.org/packages/{{ bioc }}/bioc/src/contrib/{{ name }}_{{ version }}.tar.gz'
- 'https://depot.galaxyproject.org/software/{{ name }}/{{ name }}_{{ version }}_src_all.tar.gz'
sha256: e28ebefe877de87b2b540f58d41dfb1d6a5adb7b2d3338feb937fd4ff785d51e
sha256: 1ff356bf49dea190aeab405c7785f18e7048eb31b2c7b3b86aa42f5794fccd2c
build:
number: 1
number: 0
rpaths:
- lib/R/lib/
- lib/
Expand Down
6 changes: 3 additions & 3 deletions recipes/bioconductor-bgeedb/meta.yaml
View file
Open in desktop
Original file line number Diff line number Diff line change
@@ -1,4 +1,4 @@
{% set version = "2.4.0" %}
{% set version = "2.5.0" %}
{% set name = "BgeeDB" %}
{% set bioc = "3.6" %}

Expand All @@ -9,9 +9,9 @@ source:
url:
- 'http://bioconductor.org/packages/{{ bioc }}/bioc/src/contrib/{{ name }}_{{ version }}.tar.gz'
- 'https://depot.galaxyproject.org/software/{{ name }}/{{ name }}_{{ version }}_src_all.tar.gz'
sha256: 5d906e9b41516b5203efe506084199a06fac8185d1043fadfab2c885a5090aca
sha256: a6767659cfae6423b0ed27730f8e3b88423a1b163fc433b75a9a2c08a61f0923
build:
number: 1
number: 0
rpaths:
- lib/R/lib/
- lib/
Expand Down
6 changes: 3 additions & 3 deletions recipes/bioconductor-biocstyle/meta.yaml
View file
Open in desktop
Original file line number Diff line number Diff line change
@@ -1,4 +1,4 @@
{% set version = "2.6.0" %}
{% set version = "2.6.1" %}
{% set name = "BiocStyle" %}
{% set bioc = "3.6" %}

Expand All @@ -9,9 +9,9 @@ source:
url:
- 'http://bioconductor.org/packages/{{ bioc }}/bioc/src/contrib/{{ name }}_{{ version }}.tar.gz'
- 'https://depot.galaxyproject.org/software/{{ name }}/{{ name }}_{{ version }}_src_all.tar.gz'
sha256: a8877e1a2642ae6059ef6361d839011f3e313ee3864e8c1c81af68d45d92c215
sha256: 757996af01558440ee236d70438ffaba33014b4af95f2d769b2961362f01f70e
build:
number: 1
number: 0
rpaths:
- lib/R/lib/
- lib/
Expand Down
6 changes: 3 additions & 3 deletions recipes/bioconductor-biocworkflowtools/meta.yaml
View file
Open in desktop
Original file line number Diff line number Diff line change
@@ -1,4 +1,4 @@
{% set version = "1.4.0" %}
{% set version = "1.4.2" %}
{% set name = "BiocWorkflowTools" %}
{% set bioc = "3.6" %}

Expand All @@ -9,9 +9,9 @@ source:
url:
- 'http://bioconductor.org/packages/{{ bioc }}/bioc/src/contrib/{{ name }}_{{ version }}.tar.gz'
- 'https://depot.galaxyproject.org/software/{{ name }}/{{ name }}_{{ version }}_src_all.tar.gz'
sha256: 6acba24a2c8174efd75b1ca60452fa962d2042ec8ed738e7b719df799a0eb9ea
sha256: fdfcbd3ba67394a70e32e69a22685596683282cfb36eef4f94739be14f80d7d9
build:
number: 1
number: 0
rpaths:
- lib/R/lib/
- lib/
Expand Down
6 changes: 3 additions & 3 deletions recipes/bioconductor-chemminer/meta.yaml
View file
Open in desktop
Original file line number Diff line number Diff line change
@@ -1,4 +1,4 @@
{% set version = "2.30.0" %}
{% set version = "2.30.2" %}
{% set name = "ChemmineR" %}
{% set bioc = "3.6" %}

Expand All @@ -9,9 +9,9 @@ source:
url:
- 'http://bioconductor.org/packages/{{ bioc }}/bioc/src/contrib/{{ name }}_{{ version }}.tar.gz'
- 'https://depot.galaxyproject.org/software/{{ name }}/{{ name }}_{{ version }}_src_all.tar.gz'
sha256: 54b99549687ddebab04144c6321a595e66ec0161e7d52626b8d7d4f6d55e09e1
sha256: a4a5cecbe6b0413b15e3eef1a76e1a5ae511e53e603c30747e98d14297d103d9
build:
number: 1
number: 0
rpaths:
- lib/R/lib/
- lib/
Expand Down
6 changes: 3 additions & 3 deletions recipes/bioconductor-chippeakanno/meta.yaml
View file
Open in desktop
Original file line number Diff line number Diff line change
@@ -1,4 +1,4 @@
{% set version = "3.12.0" %}
{% set version = "3.12.7" %}
{% set name = "ChIPpeakAnno" %}
{% set bioc = "3.6" %}

Expand All @@ -9,9 +9,9 @@ source:
url:
- 'http://bioconductor.org/packages/{{ bioc }}/bioc/src/contrib/{{ name }}_{{ version }}.tar.gz'
- 'https://depot.galaxyproject.org/software/{{ name }}/{{ name }}_{{ version }}_src_all.tar.gz'
sha256: fd189e557e7534e4cf7cb6dffbc5910ded2b655fd722cc93bc0a4f308b41762e
sha256: 0464e973760a0b9a7a7ee798714faeb3bd43ac371d1946bd81cba8d312224bfd
build:
number: 1
number: 0
rpaths:
- lib/R/lib/
- lib/
Expand Down
6 changes: 3 additions & 3 deletions recipes/bioconductor-compass/meta.yaml
View file
Open in desktop
Original file line number Diff line number Diff line change
@@ -1,4 +1,4 @@
{% set version = "1.16.0" %}
{% set version = "1.16.2" %}
{% set name = "COMPASS" %}
{% set bioc = "3.6" %}

Expand All @@ -10,9 +10,9 @@ source:
- 'http://bioconductor.org/packages/{{ bioc }}/bioc/src/contrib/{{ name }}_{{ version }}.tar.gz'
- 'https://bioarchive.galaxyproject.org/{{ name }}_{{ version }}.tar.gz'
- 'https://depot.galaxyproject.org/software/bioconductor-{{ name|lower }}/bioconductor-{{ name|lower }}_{{ version }}_src_all.tar.gz'
sha256: 560fa4df6e37df0db5f9bb4fd6b3067d3d52ccf3507d844b6795647b86653bf4
sha256: 6b5be248d31cb06925b5ab40e4769f5cd0a0c41a1b0150ced32807eff32b3ebd
build:
number: 1
number: 0
rpaths:
- lib/R/lib/
- lib/
Expand Down
6 changes: 3 additions & 3 deletions recipes/bioconductor-degreport/meta.yaml
View file
Open in desktop
Original file line number Diff line number Diff line change
@@ -1,4 +1,4 @@
{% set version = "1.14.0" %}
{% set version = "1.14.1" %}
{% set name = "DEGreport" %}
{% set bioc = "3.6" %}

Expand All @@ -9,9 +9,9 @@ source:
url:
- 'http://bioconductor.org/packages/{{ bioc }}/bioc/src/contrib/{{ name }}_{{ version }}.tar.gz'
- 'https://depot.galaxyproject.org/software/{{ name }}/{{ name }}_{{ version }}_src_all.tar.gz'
sha256: 47875412771c12cb55a65a3f517275a162348b0e4e2a48c30eb1f6f24129add1
sha256: c218f375ace21a7ad0cb855f4ee2a13863975c3dc7e966607efed074dfac7855
build:
number: 1
number: 0
rpaths:
- lib/R/lib/
- lib/
Expand Down
6 changes: 3 additions & 3 deletions recipes/bioconductor-derfinder/meta.yaml
View file
Open in desktop
Original file line number Diff line number Diff line change
@@ -1,4 +1,4 @@
{% set version = "1.12.0" %}
{% set version = "1.12.6" %}
{% set name = "derfinder" %}
{% set bioc = "3.6" %}

Expand All @@ -10,10 +10,10 @@ source:
url:
- 'http://bioconductor.org/packages/{{ bioc }}/bioc/src/contrib/{{ name }}_{{ version }}.tar.gz'
- 'https://depot.galaxyproject.org/software/{{ name }}/{{ name }}_{{ version }}_src_all.tar.gz'
sha256: b4c510bca06699d1490ff860ea726c214c6a4c5aa4a8e3e18e2848e45cff1d42
sha256: 80d6bae5a63d354123e2a3d534b2a96c821e38716419543e6736b35207c7e8ae

build:
number: 1
number: 0
rpaths:
- lib/R/lib/
- lib/
Expand Down
6 changes: 3 additions & 3 deletions recipes/bioconductor-derfinderplot/meta.yaml
View file
Open in desktop
Original file line number Diff line number Diff line change
@@ -1,4 +1,4 @@
{% set version = "1.12.0" %}
{% set version = "1.12.3" %}
{% set name = "derfinderPlot" %}
{% set bioc = "3.6" %}

Expand All @@ -10,10 +10,10 @@ source:
url:
- 'http://bioconductor.org/packages/{{ bioc }}/bioc/src/contrib/{{ name }}_{{ version }}.tar.gz'
- 'https://depot.galaxyproject.org/software/{{ name }}/{{ name }}_{{ version }}_src_all.tar.gz'
sha256: d77e828f9446280414c4fc7582ff4cec62488e77744a7bcbe578cc111f821dae
sha256: 805865958a047919aa764926ff7142cbdbfb4265bcfb17d2af94b49685c717dc

build:
number: 1
number: 0
rpaths:
- lib/R/lib/
- lib/
Expand Down
6 changes: 3 additions & 3 deletions recipes/bioconductor-ebimage/meta.yaml
View file
Open in desktop
Original file line number Diff line number Diff line change
@@ -1,4 +1,4 @@
{% set version = "4.20.0" %}
{% set version = "4.20.1" %}
{% set name = "EBImage" %}
{% set bioc = "3.6" %}

Expand All @@ -9,9 +9,9 @@ source:
url:
- 'http://bioconductor.org/packages/{{ bioc }}/bioc/src/contrib/{{ name }}_{{ version }}.tar.gz'
- 'https://depot.galaxyproject.org/software/{{ name }}/{{ name }}_{{ version }}_src_all.tar.gz'
sha256: 18331f7380b0f89ee6e02a07c4ba7fc9fb69d36b5daf8c48520287b30e70f220
sha256: f2e0c4c1400a15ae58bb9a90d1259935fbd848f66b8079a81ab0589d9a4c9877
build:
number: 1
number: 0
rpaths:
- lib/R/lib/
- lib/
Expand Down
6 changes: 3 additions & 3 deletions recipes/bioconductor-edger/meta.yaml
View file
Open in desktop
Original file line number Diff line number Diff line change
@@ -1,4 +1,4 @@
{% set version = "3.20.7" %}
{% set version = "3.20.9" %}
{% set name = "edgeR" %}
{% set bioc = "3.6" %}

Expand All @@ -10,9 +10,9 @@ source:
- 'http://bioconductor.org/packages/{{ bioc }}/bioc/src/contrib/{{ name }}_{{ version }}.tar.gz'
- 'https://bioarchive.galaxyproject.org/{{ name }}_{{ version }}.tar.gz'
- 'https://depot.galaxyproject.org/software/bioconductor-{{ name|lower }}/bioconductor-{{ name|lower }}_{{ version }}_src_all.tar.gz'
sha256: 5c4286fd0d80ae0696c4ef65111366152cc071c3e8fd446b2d0fce6d75b235dc
sha256: 5c61d369755e563f6286665f5feb77b4d9f5199e0dc6775afbfd8cbfb8d5a278
build:
number: 1
number: 0
rpaths:
- lib/R/lib/
- lib/
Expand Down
6 changes: 3 additions & 3 deletions recipes/bioconductor-egsea/meta.yaml
View file
Open in desktop
Original file line number Diff line number Diff line change
@@ -1,4 +1,4 @@
{% set version = "1.6.0" %}
{% set version = "1.6.1" %}
{% set name = "EGSEA" %}
{% set bioc = "3.6" %}

Expand All @@ -9,9 +9,9 @@ source:
url:
- 'http://bioconductor.org/packages/{{ bioc }}/bioc/src/contrib/{{ name }}_{{ version }}.tar.gz'
- 'https://depot.galaxyproject.org/software/{{ name }}/{{ name }}_{{ version }}_src_all.tar.gz'
sha256: 8e60d394094703e402dcb98781807ed42825f2e4e895dfea58d074fb7ca51fef
sha256: 6a2ba3ba41528288f17f1e8866664184b40f266ef5d15f4db51627d591ae32eb
build:
number: 1
number: 0
rpaths:
- lib/R/lib/
- lib/
Expand Down
6 changes: 3 additions & 3 deletions recipes/bioconductor-enrichmentbrowser/meta.yaml
View file
Open in desktop
Original file line number Diff line number Diff line change
@@ -1,4 +1,4 @@
{% set version = "2.8.5" %}
{% set version = "2.8.7" %}
{% set name = "EnrichmentBrowser" %}
{% set bioc = "3.6" %}

Expand All @@ -10,9 +10,9 @@ source:
- 'http://bioconductor.org/packages/{{ bioc }}/bioc/src/contrib/{{ name }}_{{ version }}.tar.gz'
- 'https://bioarchive.galaxyproject.org/{{ name }}_{{ version }}.tar.gz'
- 'https://depot.galaxyproject.org/software/bioconductor-{{ name|lower }}/bioconductor-{{ name|lower }}_{{ version }}_src_all.tar.gz'
sha256: f2b2e6ca297338e0a78e7627bd7d1f49d8686f10ea52e9a117db52de6b38b7ab
sha256: dbb43d4261b39aa2d33adb7bbdf521924c2f8e0304bc82e095122a12eeea998b
build:
number: 1
number: 0
rpaths:
- lib/R/lib/
- lib/
Expand Down
6 changes: 3 additions & 3 deletions recipes/bioconductor-ensemblvep/meta.yaml
View file
Open in desktop
Original file line number Diff line number Diff line change
@@ -1,4 +1,4 @@
{% set version = "1.20.0" %}
{% set version = "1.20.1" %}
{% set name = "ensemblVEP" %}
{% set bioc = "3.6" %}

Expand All @@ -10,9 +10,9 @@ source:
- 'http://bioconductor.org/packages/{{ bioc }}/bioc/src/contrib/{{ name }}_{{ version }}.tar.gz'
- 'https://bioarchive.galaxyproject.org/{{ name }}_{{ version }}.tar.gz'
- 'https://depot.galaxyproject.org/software/bioconductor-{{ name|lower }}/bioconductor-{{ name|lower }}_{{ version }}_src_all.tar.gz'
sha256: c26480895abfdab4e6763aaab35b8eb69c60beaeea4694d88c1d5dec9d39eaf7
sha256: 7bf9d3c099a71080f6556627697477f196dc26228f1acc9e55d3d6a71d84051d
build:
number: 1
number: 0
rpaths:
- lib/R/lib/
- lib/
Expand Down
6 changes: 3 additions & 3 deletions recipes/bioconductor-fgsea/meta.yaml
View file
Open in desktop
Original file line number Diff line number Diff line change
@@ -1,4 +1,4 @@
{% set version = "1.4.0" %}
{% set version = "1.4.1" %}
{% set name = "fgsea" %}
{% set bioc = "3.6" %}

Expand All @@ -9,9 +9,9 @@ source:
url:
- 'http://bioconductor.org/packages/{{ bioc }}/bioc/src/contrib/{{ name }}_{{ version }}.tar.gz'
- 'https://depot.galaxyproject.org/software/{{ name }}/{{ name }}_{{ version }}_src_all.tar.gz'
sha256: 580602aa630e80cc8c0c3f5ea27df0c4192fec826a988a9bca3822ac31143711
sha256: a0c8c6fee05b7a0c4ba3fe9fdbb1bcb78ef5ae8ada161453b841833e5947eca0
build:
number: 1
number: 0
rpaths:
- lib/R/lib/
- lib/
Expand Down
6 changes: 3 additions & 3 deletions recipes/bioconductor-flowai/meta.yaml
View file
Open in desktop
Original file line number Diff line number Diff line change
@@ -1,4 +1,4 @@
{% set version = "1.6.2" %}
{% set version = "1.6.3" %}
{% set name = "flowAI" %}
{% set bioc = "3.6" %}

Expand All @@ -9,9 +9,9 @@ source:
url:
- 'http://bioconductor.org/packages/{{ bioc }}/bioc/src/contrib/{{ name }}_{{ version }}.tar.gz'
- 'https://depot.galaxyproject.org/software/{{ name }}/{{ name }}_{{ version }}_src_all.tar.gz'
sha256: a3c4b4152fadd0aa6fd812d4dbb888700aee141dc7b5a26fe81cb408c58abdfe
sha256: 2f00435a01ca02fde97d5582e7b4e0df2a74b3490e4adf4bfe044b1785619ff5
build:
number: 1
number: 0
rpaths:
- lib/R/lib/
- lib/
Expand Down
6 changes: 3 additions & 3 deletions recipes/bioconductor-flowcl/meta.yaml
View file
Open in desktop
Original file line number Diff line number Diff line change
@@ -1,4 +1,4 @@
{% set version = "1.16.0" %}
{% set version = "1.16.2" %}
{% set name = "flowCL" %}
{% set bioc = "3.6" %}

Expand All @@ -9,9 +9,9 @@ source:
url:
- 'http://bioconductor.org/packages/{{ bioc }}/bioc/src/contrib/{{ name }}_{{ version }}.tar.gz'
- 'https://depot.galaxyproject.org/software/{{ name }}/{{ name }}_{{ version }}_src_all.tar.gz'
sha256: 2946890c0db5cef68a27a654082b0ee2dadb3e2998a5471a795594237d470f62
sha256: d2ae60dfd5fa4ece2d350ac41893b5b4efce7e5229c2cc5ac584f7e3586251fd
build:
number: 1
number: 0
rpaths:
- lib/R/lib/
- lib/
Expand Down
Loading