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Update shovill to 1.0.0 #10256

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Aug 5, 2018
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33 changes: 18 additions & 15 deletions recipes/shovill/meta.yaml
Original file line number Diff line number Diff line change
@@ -1,42 +1,45 @@
{% set version = "0.9.0" %}
{% set version = "1.0.0" %}
{% set name = "shovill" %}

package:
name: {{ name }}
version: {{ version }}

build:
number: 1
number: 0

source:
url: https://github.com/tseemann/shovill/archive/v{{ version }}.tar.gz
sha256: 0a428609ec39661eb4af417d24e1a5d4cfe5cbc120f7999914c19406fddd41cd
url: https://github.com/tseemann/{{ name }}/archive/v{{ version }}.tar.gz
sha256: 722adeef163c2dba42dbf06e905c4abd4a97816bb227d776213a9c05898cc371

requirements:
run:
- perl
- perl-time-piece
- perl-file-spec
- perl-findbin
- unzip
- lighter
- bwa
- kmc >=2
- flash
- lighter >=1.1
- bwa >=0.7.17
- mash >=2
- flash >=1.2
- pilon >=1.22
- seqtk
- trimmomatic
- spades
- seqtk >=1.3
- skesa >=2.2
- megahit >=1.1
- velvet >=1.2.10
- samclip >=0.2
- trimmomatic >=0.36
- spades >=3.6
- pigz
- samtools >=1.3
- samtools >=1.8

test:
commands:
- "shovill --help"
- "shovill --version"
- "shovill --check"

about:
home: https://github.com/tseemann/shovill
license: GPL2
license_file: LICENSE
summary: Faster SPAdes assembly of Illumina reads
summary: Pipeline for assembly of Illumina paired-end reads