Add r-htssip

recipes/r-htssip/build.sh

@@ -0,0 +1,8 @@
+#!/bin/bash
+if [[ $target_platform =~ linux.* ]] || [[ $target_platform == win-32 ]] || [[ $target_platform == win-64 ]] || [[ $target_platform == osx-64 ]]; then
+  export DISABLE_AUTOBREW=1
+  $R CMD INSTALL --build .
+else
+  mkdir -p $PREFIX/lib/R/library/HTSSIP
+  mv * $PREFIX/lib/R/library/HTSSIP
+fi

recipes/r-htssip/meta.yaml

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+{% set version = '1.4.0' %}
+{% set posix =  '' %}
+{% set native =  '' %}
+
+package:
+  name: r-htssip
+  version: {{ version|replace("-", "_") }}
+
+source:
+  url: {{ cran_mirror }}/src/contrib/HTSSIP_{{ version }}.tar.gz
+  sha256: db93fe66ac3cbde74816cd4c1354e450b398f190fb291b9369b2e753e2e28e13
+
+build:
+  number: 0
+  rpaths:
+    - lib/R/lib/
+    - lib/
+
+requirements:
+  build:
+  host:
+    - r-base
+    - bioconductor-deseq2 >=1.16.1
+    - r-ape >=4.1
+    - r-coenocliner >=0.2.2
+    - r-dplyr >=0.7.4
+    - r-ggplot2 >=2.2.1
+    - r-igraph >=1.1.2
+    - r-lazyeval >=0.2.0
+    - r-magrittr >=1.5
+    - bioconductor-phyloseq >=1.20.0
+    - r-plyr >=1.8.4
+    - r-stringr >=1.2.0
+    - r-tidyr >=0.7.2
+    - r-vegan >=2.4.0
+  run:
+    - r-base
+    - bioconductor-deseq2 >=1.16.1
+    - r-ape >=4.1
+    - r-coenocliner >=0.2.2
+    - r-dplyr >=0.7.4
+    - r-ggplot2 >=2.2.1
+    - r-igraph >=1.1.2
+    - r-lazyeval >=0.2.0
+    - r-magrittr >=1.5
+    - bioconductor-phyloseq >=1.20.0
+    - r-plyr >=1.8.4
+    - r-stringr >=1.2.0
+    - r-tidyr >=0.7.2
+    - r-vegan >=2.4.0
+
+test:
+  commands:
+    - $R -e "library('HTSSIP')"
+
+about:
+  home: https://CRAN.R-project.org/package=HTSSIP
+  license: GPL-2
+  summary: 'Functions for analyzing high throughput sequencing stable isotope probing (HTS-SIP)
+    data. Analyses include high resolution stable isotope probing (HR-SIP), multi-window
+    high resolution stable isotope probing (MW-HR-SIP), and quantitative stable isotope
+    probing (q-SIP).' 
+  license_family: GPL2
+  license_file: '{{ environ["PREFIX"] }}/lib/R/share/licenses/GPL-2'
+
+extra:
+  recipe-maintainers:
+    - nick-youngblut