Skip to content

Commit

Permalink
Adding biobb_model recipe (#11472)
Browse files Browse the repository at this point in the history
  • Loading branch information
PauAndrio authored Oct 22, 2018
1 parent 4cfba55 commit efce91a
Show file tree
Hide file tree
Showing 2 changed files with 72 additions and 0 deletions.
11 changes: 11 additions & 0 deletions recipes/biobb_model/build.sh
Original file line number Diff line number Diff line change
@@ -0,0 +1,11 @@
#!/usr/bin/env bash

python3 setup.py install --single-version-externally-managed --record=record.txt

mkdir -p $PREFIX/bin

chmod u+x $SP_DIR/biobb_model/model/mutate.py
cp $SP_DIR/biobb_model/model/mutate.py $PREFIX/bin/mutate

chmod u+x $SP_DIR/biobb_model/model/fix_side_chain.py
cp $SP_DIR/biobb_model/model/fix_side_chain.py $PREFIX/bin/fix_side_chain
61 changes: 61 additions & 0 deletions recipes/biobb_model/meta.yaml
Original file line number Diff line number Diff line change
@@ -0,0 +1,61 @@
{% set name = "biobb_model" %}
{% set version = "0.0.6" %}
{% set file_ext = "tar.gz" %}
{% set hash_type = "sha256" %}
{% set hash_value = "08a65063de45b6fafe1ccbc85197688c1571aacf1250c9f3a288a3885a2840f0" %}

package:
name: '{{ name|lower }}'
version: '{{ version }}'

source:
url: https://pypi.io/packages/source/{{ name[0] }}/{{ name }}/{{ name }}-{{ version }}.{{ file_ext }}
'{{ hash_type }}': '{{ hash_value }}'

build:
number: 0
noarch: python

requirements:
host:
- python >=3.5
- setuptools
- mistune ==0.7.4
- jsonschema ==2.6.0
- biobb_common
- biopython
run:
- python >=3.5
- mistune ==0.7.4
- jsonschema ==2.6.0
- biobb_common
- biopython

test:
imports:
- biobb_model
- biobb_model.model
- biobb_model.pycompss
- biobb_model.pycompss.model
- biobb_model.structure_checking
- biobb_model.structure_manager
- biobb_model.test

about:
home: https://github.com/bioexcel/biobb_model
license: Apache Software License
license_family: APACHE
license_file: ''
summary: biobb_model is the Biobb module collection to fetch data to be consumed by the rest of the Biobb building blocks.
description: "[![Documentation Status](https://readthedocs.org/projects/biobb-model/badge/?version=latest)](https://biobb-model.readthedocs.io/en/latest/?badge=latest)\n[![Codacy Badge](https://api.codacy.com/project/badge/Grade/f98ed1286f244616bf39352e1877d310)](https://www.codacy.com/app/andriopau/biobb_model?utm_source=github.com&utm_medium=referral&utm_content=bioexcel/biobb_model&utm_campaign=Badge_Grade)\n\
\n# biobb_model\n\n### Introduction\nBiobb_model is the Biobb module collection to check and model 3d structures,\ncreate mutations or reconstruct missing atoms.\nBiobb (BioExcel building blocks) packages\
\ are Python building blocks that\ncreate new layer of compatibility and interoperability over popular\nbioinformatics tools.\nThe latest documentation of this package can be found in our readthedocs\
\ site:\n[latest API documentation](http://biobb_model.readthedocs.io/en/latest/).\n\n### Version\nThis software is in Alpha version.\n\n### Copyright & Licensing\nThis software has been developed in\
\ the MMB group (http://mmb.irbbarcelona.org) at the\nBSC (http://www.bsc.es/) & IRB (https://www.irbbarcelona.org/) for the European BioExcel (http://bioexcel.eu/), funded by the European Commission\n\
(EU H2020 [675728](http://cordis.europa.eu/projects/675728)).\n\n* (c) 2015-2018 [Barcelona Supercomputing Center](https://www.bsc.es/)\n* (c) 2015-2018 [Institute for Research in Biomedicine](https://www.irbbarcelona.org/)\n\
\nLicensed under the\n[Apache License 2.0](https://www.apache.org/licenses/LICENSE-2.0), see the file\n[LICENSE](LICENSE) for details.\n\n![](docs/source/_static/bioexcel_logo.png \"Bioexcel\")\n\n\n"
doc_url: ''
dev_url: ''

extra:
recipe-maintainers: ''

0 comments on commit efce91a

Please sign in to comment.