Replace gcc call with x86_64-apple-darwin13.4.0-clang

bioconda · Feb 5, 2019 · bc6e1b9 · bc6e1b9
1 parent 361b609
commit bc6e1b9
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diff --git a/recipes/fastq_utils/build.sh b/recipes/fastq_utils/build.sh
@@ -3,13 +3,12 @@
 mkdir -p $PREFIX/bin
 
 export C_INCLUDE_PATH="${PREFIX}/include:${PREFIX}/include/bam"
-#export CPP_INCLUDE_PATH="${PREFIX}/include"
 export CXX_INCLUDE_PATH="${PREFIX}/include"
-#export CPLUS_INCLUDE_PATH="${PREFIX}/include"
 export LIBRARY_PATH="${PREFIX}/lib"
 
-# Run the main install
+# Compile and install. Replace gcc with $CC
 
+sed -i.bak "s/gcc/\$CC/g" Makefile
 make
 make install
 

diff --git a/recipes/fastq_utils/meta.yaml b/recipes/fastq_utils/meta.yaml
@@ -16,7 +16,6 @@ requirements:
   build:
     - {{ compiler('c') }}
     - make
-    - libtool
     - zlib
   host:
     - samtools ==0.1.19
-Original file line number
+Diff line change
@@ Expand Up / @@ -16,7 +16,6 @@ requirements: @@
       build:
         - {{ compiler('c') }}
         - make
-        - libtool
         - zlib
       host:
         - samtools ==0.1.19
@@ Expand Down @@