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Update SACCHARIS (#52118)
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* Add recipe for saccharis 2.0 dev18 build 1 to bioconda

* updated to use git tag

* updated to use a python package generated from setuptools build, with sha256 hash, and added --single-version-externally-managed --record=record.txt args to setup.py install as per bioconda test suite

* lowercased hash, since it's case-sensitive

* added filename as "fn: saccharis-{{ version }}.tar.gz"

* removed filename since bioconda considers it an error

* update url link

* update sha256

* remove unneeded comments

* remove tests which write files

* remove tests which write files, with comment

* add new release data to bioconda recipe

* change build number to zero to satisfy bioconda linter

* add blast dependency

* add run_exports breaking change behaviour

* change name to lowercase in run_exports

* fix spacing

* nesting issue

* remove nesting

* fix version spacing

* update to dev20

* update to dev20

* update to dev21

* fix >= sign

* increment build to fix small error

* update file hash and increment build

* revert 2.0.1 to working dev21 build

* upload 2.0.1 dev21 version with fixed database download

* upload 2.0.1 dev21 version with another database download fix

* increment build num

* increment build num

* increment build num

* update setuptools build requirements

* update setuptools build requirements

* update to build 3, which replaces wget with requests

* update hash

* increment build with yet another small patch to try and fix these database downloads

* increment build with yet another small patch to try and fix database downloads

* adjust whitespace

* increment to build 6

* update python dependency

* increment to build 7

adds chunk reducing size to database download streaming

* update cazy.org links to https

increment to build 8
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AlexSCFraser authored Nov 15, 2024
1 parent 52b92a7 commit 8754263
Showing 1 changed file with 3 additions and 3 deletions.
6 changes: 3 additions & 3 deletions recipes/saccharis/meta.yaml
Original file line number Diff line number Diff line change
@@ -1,6 +1,6 @@
{% set name = "SACCHARIS" %}
{% set version = "2.0.1.dev21" %}
{% set hash = "DEFE4B98CFF4F5ED58A102D7FFE0CC219C4EC44C257AC0469255CDC73F124F57" %}
{% set hash = "C808429EADDAA31E0E611DF0564BA6CA36CE6CBB69A98DFB79CC59972352FD16" %}


package:
Expand All @@ -9,12 +9,12 @@ package:

source:
# url: https://github.com/saccharis/SACCHARIS_2/releases/download/v{{ version }}/saccharis-{{ version }}.tar.gz
url: https://github.com/saccharis/SACCHARIS_2/releases/download/v2.0.1.dev21/saccharis-2.0.1.dev21_7.tar.gz
url: https://github.com/saccharis/SACCHARIS_2/releases/download/v2.0.1.dev21/saccharis-2.0.1.dev21_8.tar.gz
sha256: {{ hash|lower }}

build:
noarch: python
number: 7
number: 8

script: {{ PYTHON }} setup.py install --single-version-externally-managed --record=record.txt
preserve_egg_dir: True # added because the entry points below seem to be causing a build error
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