integration to bioconda (#12456)

recipes/bwise/build.sh

@@ -0,0 +1,14 @@
+#!/bin/bash
+
+cd src;
+make;
+
+
+mkdir -p $PREFIX/bin;
+cp src/path_counter Bwise_path_counter;
+cp src/path_to_kmer Bwise_path_to_kmer;
+cp src/maximal_sr Bwise_maximal_sr;
+cp src/K2000/K2000.py Bwise_K2000.py;
+cp src/K2000/K2000_msr_to_gfa.py Bwise_K2000_msr_to_gfa.py;
+cp src/K2000/K2000_gfa_to_fasta.py Bwise_K2000_gfa_to_fasta.py;
+cp src/Bwise_conda $PREFIX/bin/bwise;

recipes/bwise/meta.yaml

@@ -0,0 +1,35 @@
+{% set version = "1.0.0" %}
+
+
+package:
+  name: bwise
+  version: '{{version}}'
+
+source:
+  url: "https://github.com/Malfoy/BWISE/archive/1.0.0.tar.gz"
+  sha256: daca421f91e9b3a4c272b46665df2e681d0068bb53fde86f41f04a2637f4f91d
+
+build:
+  number: 0
+  skip: true # [osx]
+  skip: True # [py27]
+
+requirements:
+  build:
+    - {{ compiler('c') }}
+    - {{ compiler('cxx') }}
+
+  run:
+    - python
+    - bgreat
+    - bcalm
+    - btrim
+
+test:
+  commands:
+    - bwise
+
+about:
+  home: https://github.com/Malfoy/BWISE
+  license: AGPL-3.0
+  summary: BWISE is a de Bruijn assembly Workflow using Integral information of Short paired-End reads