Add Liana+ to biocodna (#51736)

* meta.yaml created by grayskul * add run_exports * Update recipes/liana/meta.yaml Co-authored-by: Björn Grüning <[email protected]> * update meta * Update meta.yaml * Update meta.yaml --------- Co-authored-by: Björn Grüning <[email protected]>
bioconda · Oct 31, 2024 · 5048dce · 5048dce
1 parent 9df90ee
commit 5048dce
Showing 1 changed file with 62 additions and 0 deletions.
diff --git a/recipes/liana/meta.yaml b/recipes/liana/meta.yaml
@@ -0,0 +1,62 @@
+{% set name = "liana" %}
+{% set version = "1.4.0" %}
+
+package:
+  name: {{ name|lower }}
+  version: {{ version }}
+
+source:
+  url: https://pypi.org/packages/source/{{ name[0] }}/{{ name }}/liana-{{ version }}.tar.gz
+  sha256: 1172a9bef67ee22d5eb3f27144c61dddec3122bd515b131c9ed5b0529fcbf2d1
+
+build:
+  noarch: python
+  script: {{ PYTHON }} -m pip install . -vv --no-deps --no-build-isolation
+  number: 0
+  run_exports:
+    - {{ pin_subpackage("liana", max_pin="x.x.x") }}
+
+requirements:
+  host:
+    - python >=3.8,<3.12
+    - poetry-core >=1.0.0
+    - pip
+  run:
+    - python >=3.8,<3.12
+    - anndata >=0.7.4
+    - mudata
+    - scanpy >=1.8.0
+    - numba >=0.54.0
+    - plotnine >=0.10.0
+    - tqdm >=4.0.0,<5.0.0
+    - docrep >=0.3.1
+    - pre-commit >=3.0.0
+    - omnipath >=1.0.6
+    - decoupler >=1.4.0
+    - pydeseq2 >=0.3.5
+    - cell2cell
+    - muon
+    - mofax
+    - mofapy2 >=0.7.0
+    - corneto
+    - cvxpy >=1.4,<2
+    - cylp >=0.91.5,<0.92.0
+    - requests >=2.25.1,<3.0.0
+
+test:
+  imports:
+    - liana
+  commands:
+    - pip check
+  requires:
+    - pip
+
+about:
+  home: https://liana-py.readthedocs.io
+  summary: 'LIANA+: a one-stop-shop framework for cell-cell communication'
+  license: GPL-3.0-or-later
+  license_file: LICENSE
+
+extra:
+  recipe-maintainers:
+    - nilchia