-
Notifications
You must be signed in to change notification settings - Fork 3.3k
Commit
This commit does not belong to any branch on this repository, and may belong to a fork outside of the repository.
* Add r-ggrasp * trivial change to restart checks now the r-bgmm is on conda-forge
- Loading branch information
1 parent
4d6faca
commit 44ea979
Showing
2 changed files
with
64 additions
and
0 deletions.
There are no files selected for viewing
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
Original file line number | Diff line number | Diff line change |
---|---|---|
@@ -0,0 +1,8 @@ | ||
#!/bin/bash | ||
if [[ $target_platform =~ linux.* ]] || [[ $target_platform == win-32 ]] || [[ $target_platform == win-64 ]] || [[ $target_platform == osx-64 ]]; then | ||
export DISABLE_AUTOBREW=1 | ||
$R CMD INSTALL --build . | ||
else | ||
mkdir -p $PREFIX/lib/R/library/ggrasp | ||
mv * $PREFIX/lib/R/library/ggrasp | ||
fi |
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
Original file line number | Diff line number | Diff line change |
---|---|---|
@@ -0,0 +1,56 @@ | ||
{% set version = '1.0' %} | ||
{% set posix = '' %} | ||
{% set native = '' %} | ||
|
||
package: | ||
name: r-ggrasp | ||
version: {{ version|replace("-", "_") }} | ||
|
||
source: | ||
url: {{ cran_mirror }}/src/contrib/ggrasp_{{ version }}.tar.gz | ||
sha256: 0133019df762cd19d7daf1b5f2b353c43568124ade6e34fa04837656138a3652 | ||
|
||
build: | ||
number: 0 | ||
rpaths: | ||
- lib/R/lib/ | ||
- lib/ | ||
|
||
requirements: | ||
build: | ||
host: | ||
- r-base | ||
- r-ape | ||
- r-bgmm | ||
- r-colorspace | ||
- r-ggplot2 | ||
- r-mixtools | ||
run: | ||
- r-base | ||
- r-ape | ||
- r-bgmm | ||
- r-colorspace | ||
- r-ggplot2 | ||
- r-mixtools | ||
|
||
test: | ||
commands: | ||
- $R -e "library('ggrasp')" | ||
|
||
about: | ||
home: https://CRAN.R-project.org/package=ggrasp | ||
license: GPL-2 | ||
summary: 'Given a group of genomes and their relationship with each other, the package clusters | ||
the genomes and selects the most representative members of each cluster. Additional | ||
data can be provided to the prioritize certain genomes. The results can be printed | ||
out as a list or a new phylogeny with graphs of the trees and distance distributions | ||
also available. For detailed introduction see: Thomas H Clarke, Lauren M Brinkac, | ||
Granger Sutton, and Derrick E Fouts (2018), GGRaSP: a R-package for selecting representative | ||
genomes using Gaussian mixture models, Bioinformatics, bty300, | ||
<doi:10.1093/bioinformatics/bty300>.' | ||
license_family: GPL2 | ||
license_file: '{{ environ["PREFIX"] }}/lib/R/share/licenses/GPL-2' | ||
|
||
extra: | ||
recipe-maintainers: | ||
- nick-youngblut |