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Update quota_anchor to 0.0.1a1 (#51585)
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* Update quota_anchor to 0.0.1a1

* Update dependencies

* edit tests

* add alive-progress

---------

Co-authored-by: mencian <[email protected]>
Co-authored-by: Joshua Zhuang <[email protected]>
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3 people authored Oct 29, 2024
1 parent 341e840 commit 3dadfe4
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Showing 2 changed files with 10 additions and 7 deletions.
3 changes: 2 additions & 1 deletion recipes/quota_anchor/build.sh
Original file line number Diff line number Diff line change
@@ -1,5 +1,6 @@
#!/bin/bash
$PYTHON -m pip install --no-deps --ignore-installed . -vv

$PYTHON -m pip install --no-deps --no-build-isolation --no-cache-dir . -vvv
echo "[software]
gffread = ${PREFIX}/bin/gffread
AnchorWave = ${PREFIX}/bin/anchorwave
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14 changes: 8 additions & 6 deletions recipes/quota_anchor/meta.yaml
Original file line number Diff line number Diff line change
@@ -1,6 +1,6 @@
{% set name = "quota_anchor" %}
{% set version = "0.0.1a0" %}
{% set sha256 = "01d8520825fee67f8c73803d3bbe7855291592c064cd2d5712d02e104a71a8fa" %}
{% set version = "0.0.1a1" %}
{% set sha256 = "b6eb3ba82a32a8a5e238615dac6ef0eeef5de0d584643132b903dcddb94e760d" %}

package:
name: {{ name }}
Expand All @@ -19,7 +19,8 @@ build:
requirements:
host:
- python >=3
- pip
- pip
- setuptools
run:
- python >=3
- gffread
Expand All @@ -33,18 +34,19 @@ requirements:
- pal2nal
- paml
- plotnine
- seaborn
- seaborn-base
- pandas
- numpy

- alive-progress

test:
commands:
- 'quota_Anchor 2>&1 | grep "usage: quota_Anchor"'
- 'quota_Anchor -h'

about:
home: https://github.com/baoxingsong/quota_Anchor
license: MIT
license_family: MIT
summary: 'Strand and WGD aware syntenic gene identification'
description: "Strand and WGD aware syntenic gene identification for comparative genomics"
dev_url: https://github.com/baoxingsong/quota_Anchor

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