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update deprecated prefix variable
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Daniel Maticzka committed Oct 8, 2018
1 parent 868551b commit 2559439
Showing 1 changed file with 4 additions and 9 deletions.
13 changes: 4 additions & 9 deletions recipes/graphprot/build.sh
Original file line number Diff line number Diff line change
Expand Up @@ -4,11 +4,6 @@ export CFLAGS="-I$PREFIX/include"
export LDFLAGS="-L$PREFIX/lib"
export CPATH=${PREFIX}/include

# set install paths
BIN=${CONDA_PREFIX}/bin/
LIBEXEC=${CONDA_PREFIX}/libexec/graphprot/
SHARE=${CONDA_PREFIX}/share/graphprot/

# compile EDeN
pushd .
cd EDeN
Expand All @@ -21,7 +16,7 @@ pytest

# install
mkdir -p $BIN $LIBEXEC $SHARE
cp $SRC_DIR/GraphProt.pl $BIN
cp $SRC_DIR/bin/* $LIBEXEC -r
cp $SRC_DIR/EDeN/EDeN $LIBEXEC
cp $SRC_DIR/data $SHARE -r
cp $SRC_DIR/GraphProt.pl ${PREFIX}/bin/
cp -r $SRC_DIR/bin/* ${PREFIX}/libexec/graphprot/
cp $SRC_DIR/EDeN/EDeN ${PREFIX}/libexec/graphprot/
cp -r $SRC_DIR/data ${PREFIX}/share/graphprot/

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