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Add wsidicomizer recipe
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hexylena committed Nov 8, 2024
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53 changes: 53 additions & 0 deletions recipes/wsidicomizer/meta.yaml
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{% set name = "wsidicomizer" %}
{% set version = "0.15.0" %}
package:
name: {{ name|lower }}
version: {{ version }}
source:
url: https://pypi.org/packages/source/{{ name[0] }}/{{ name }}/wsidicomizer-{{ version }}.tar.gz
sha256: 8610ca7abdeae840a4c9a8b064b3ea209256896835dbf361db87f264ad13466f
build:
entry_points:
- wsidicomizer = wsidicomizer.cli:main
- bioformats_wsidicomizer = wsidicomizer.extras.bioformats.bioformats_cli:main
noarch: python
script: {{ PYTHON }} -m pip install . -vv --no-deps --no-build-isolation
number: 0
run_exports:
- {{ pin_subpackage("wsidicomizer", max_pin="x.x") }}
requirements:
host:
- python >=3.10,<4.0
- poetry-core >=1.2.0
- pip
run:
- python >=3.10.0,<4.0.0
- wsidicom >=0.21.1,<0.22.0
- opentile >=0.13.1,<0.14.0
- numpy >=1.22.0
- pydicom >=3.0.0
- czifile >=2019.7.2,<2020.0.0
- tiffslide >=2.4.0,<3.0.0
- imagecodecs !=2024.9.22,<2025.0.0,>=2024.1.1
run_constrained:
- openslide-python >=1.3.0,<2.0.0
- scyjava >=1.8.1,<2.0.0
- ome-types >=0.5.0,<0.6.0
- imagecodecs >=2024.1.1,<2025.0.0,!=2024.9.22
test:
imports:
- wsidicomizer
commands:
- pip check
- wsidicomizer --help
- bioformats_wsidicomizer --help
requires:
- pip
about:
home: https://github.com/imi-bigpicture/wsidicomizer
summary: Tool for reading WSI files from proprietary formats and optionally convert them to to DICOM
license: Apache-2.0
license_file: PLEASE_ADD_LICENSE_FILE
extra:
recipe-maintainers:
- hexylena

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