GitHub - biobenkj/SPARTA

Branches Tags

Name		Name	Last commit message	Last commit date
Latest commit History 5 Commits
DE_analysis		DE_analysis
ExampleData		ExampleData
Mapping_and_counting		Mapping_and_counting
QC_analysis		QC_analysis
ConfigFile.txt		ConfigFile.txt
README.txt		README.txt
SPARTA.py		SPARTA.py
check_dependencies_linux.py		check_dependencies_linux.py
differential_expression.py		differential_expression.py
install_dependencies.sh		install_dependencies.sh
install_edger.r		install_edger.r
mapping_and_counting.py		mapping_and_counting.py
qc_analysis.py		qc_analysis.py

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Welcome to SPARTA!

SPARTA is a Simple Program for Automated reference-based, bacterial RNA-seq Transcriptome Analysis. 

Please go to sparta.readthedocs.org for the tutorial.