bump more snakemake versions in wrapper envs

bihealth · Dec 12, 2024 · ee4cbe1 · ee4cbe1
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commit ee4cbe1
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Showing 5 changed files with 5 additions and 5 deletions.
diff --git a/snappy_wrappers/wrappers/eb_filter_par/environment.yaml b/snappy_wrappers/wrappers/eb_filter_par/environment.yaml
@@ -12,6 +12,6 @@ dependencies:
   - bcftools==1.19
   - htslib==1.19.1
   - samtools==1.19.2
-  - snakemake-minimal==7.32.4
+  - snakemake-minimal =8.25
   - cffi==1.16.0
   - pandas==2.2.1
diff --git a/snappy_wrappers/wrappers/gatk_hc_par/environment.yaml b/snappy_wrappers/wrappers/gatk_hc_par/environment.yaml
@@ -9,4 +9,4 @@ dependencies:
   - samtools==1.12
   - htslib==1.12
   - coincbc==2.10.10
-  - snakemake-minimal==7.32.4
+  - snakemake-minimal =8.25
diff --git a/snappy_wrappers/wrappers/jannovar/environment.yaml b/snappy_wrappers/wrappers/jannovar/environment.yaml
@@ -6,6 +6,6 @@ dependencies:
   - bcftools==1.12
   - htslib==1.12
   - jannovar-cli==0.34
-  - snakemake-minimal==8.9.0
+  - snakemake-minimal =8.25
   - ruamel==1.0
   - ruamel.yaml==0.18.6
diff --git a/snappy_wrappers/wrappers/mbcs/environment.yaml b/snappy_wrappers/wrappers/mbcs/environment.yaml
@@ -6,7 +6,7 @@ dependencies:
   - cffi==1.16.0
   - pandas==2.2.1
   - numpy==1.26.4
-  - snakemake-minimal==7.32.4
+  - snakemake-minimal =8.25
   - openjdk==17.0.10
   - seqtk==1.4
   - samtools==1.19

diff --git a/snappy_wrappers/wrappers/mutect2/environment.yaml b/snappy_wrappers/wrappers/mutect2/environment.yaml
@@ -10,7 +10,7 @@ dependencies:
   - datrie==0.8.2
   - gawk==5.1.0
   # snakemake needed by the parallel wrapper
-  - snakemake-minimal =8.10
+  - snakemake-minimal =8.25
   # needed by snakemake
   - cffi==1.16.0
   - numpy==1.26.4