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CADD missing for novel indels #125

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holtgrewe opened this issue Oct 13, 2023 · 2 comments · Fixed by #133
Closed

CADD missing for novel indels #125

holtgrewe opened this issue Oct 13, 2023 · 2 comments · Fixed by #133
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@holtgrewe
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Describe the bug
We don't have a CADD score for non-precomputed values at the moment.

To Reproduce
Steps to reproduce the behavior:

  1. Go to https://reev.cubi.bihealth.org/variant/chr4:111539501:AAG:G/grch37
  2. Scroll down to variant tools
  3. See no data is available

Expected behavior
CADD score should display.

Screenshots
image

Additional context

  • CADD scores are currently only available for some precomputed indels on top of all possible SNVs.
@holtgrewe holtgrewe added the bug Something isn't working label Oct 13, 2023
@holtgrewe holtgrewe added this to the 0.1.0 milestone Oct 13, 2023
@holtgrewe
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@gromdimon please add a note if no variant prediction is available that reads "Variant predictions are currently only available for SNVs and certain precomputed indels." Then put mileston of 1.0.0.

@holtgrewe
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More examples:

  • chr4:113568536:G:GA

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