chore: initializing repository

.editorconfig

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+# http://editorconfig.org
+
+root = true
+
+[*]
+charset = utf-8
+end_of_line = lf
+insert_final_newline = true
+trim_trailing_whitespace = true
+
+[*.{py,rst,ini}]
+indent_style = space
+indent_size = 4
+
+[*.py]
+line_length=120
+known_first_party=varfish
+multi_line_output=3
+default_section=THIRDPARTY
+
+[*.{html,css,scss,json,yml}]
+indent_style = space
+indent_size = 2
+
+[*.md]
+trim_trailing_whitespace = false
+
+[Makefile]
+indent_style = tab
+
+[nginx.conf]
+indent_style = space
+indent_size = 2

.github/ISSUE_TEMPLATE/bug_report.md

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+---
+name: Bug report
+about: Create a report to help us improve
+title: ''
+labels: bug
+assignees: ''
+
+---
+
+<!--
+For general questions please use the Discussions section of the project:
+
+https://github.com/bihealth/reev/discussions
+
+For bug reports and feature requests please open a ticket using the templates!
+-->
+
+**Describe the bug**
+A clear and concise description of what the bug is.
+
+**To Reproduce**
+Steps to reproduce the behavior:
+1. Go to '...'
+2. Click on '....'
+3. Scroll down to '....'
+4. See error
+
+**Expected behavior**
+A clear and concise description of what you expected to happen.
+
+**Screenshots**
+If applicable, add screenshots to help explain your problem.
+
+**Desktop (please complete the following information):**
+ - OS: [e.g. iOS]
+ - Browser [e.g. chrome, safari]
+ - Version [e.g. 22]
+
+**Smartphone (please complete the following information):**
+ - Device: [e.g. iPhone6]
+ - OS: [e.g. iOS8.1]
+ - Browser [e.g. stock browser, safari]
+ - Version [e.g. 22]
+
+**Additional context**
+Add any other context about the problem here.

.github/ISSUE_TEMPLATE/feature_request.md

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+---
+name: Feature request
+about: Suggest an idea for this project
+title: ''
+labels: enhancement
+assignees: ''
+
+---
+
+<!--
+For general questions please use the Discussions section of the project:
+
+https://github.com/bihealth/reev/discussions
+
+For bug reports and feature requests please open a ticket using the templates!
+-->
+
+**Is your feature request related to a problem? Please describe.**
+A clear and concise description of what the problem is. Ex. I'm always frustrated when [...]
+
+**Describe the solution you'd like**
+A clear and concise description of what you want to happen.
+
+**Describe alternatives you've considered**
+A clear and concise description of any alternative solutions or features you've considered.
+
+**Additional context**
+Add any other context or screenshots about the feature request here.

.github/workflows/automerge.yml

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+name: Dependabot auto-merge
+
+on: pull_request
+
+permissions:
+  contents: write
+
+jobs:
+  dependabot:
+    runs-on: ubuntu-latest
+    if: ${{ github.actor == 'dependabot[bot]' }}
+    steps:
+      - name: Enable auto-merge for Dependabot PRs
+        run: gh pr merge --auto --squash "$PR_URL"
+        env:
+          PR_URL: ${{github.event.pull_request.html_url}}
+          # GitHub provides this variable in the CI env. You don't
+          # need to add anything to the secrets vault.
+          GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}

.github/workflows/conventional-prs.yml

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+name: PR
+on:
+  pull_request_target:
+    types:
+      - opened
+      - reopened
+      - edited
+      - synchronize
+
+jobs:
+  title-format:
+    runs-on: ubuntu-latest
+    steps:
+      - uses: amannn/[email protected]
+        env:
+          GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
+        with:
+          validateSingleCommit: true

.github/workflows/docker-build.yml

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+on:
+  push:
+    branches:
+      - main
+  pull_request:
+    branches:
+      - main
+
+# This workflow is run as part of CI to test that they run through.
+#
+# The images are pushed to `ghcr.io` for each PR and branch.  The ones for
+# the releases are pushed in `release-please.yml`.
+name: Docker Build
+
+env:
+  REGISTRY: ghcr.io
+  IMAGE_NAME: ${{ github.repository }}
+
+jobs:
+  Image-Build-Push:
+    runs-on: ubuntu-latest
+    permissions:
+      contents: read
+      packages: write
+
+    steps:
+      - name: Checkout repository
+        uses: actions/checkout@v3
+
+      - name: Log in to the Container registry
+        uses: docker/login-action@v2
+        with:
+          registry: ${{ env.REGISTRY }}
+          username: ${{ github.actor }}
+          password: ${{ secrets.GITHUB_TOKEN }}
+
+      - name: Extract metadata (tags, labels) for Docker
+        id: meta
+        uses: docker/metadata-action@v4
+        with:
+          images: ${{ env.REGISTRY }}/${{ env.IMAGE_NAME }}
+          tags: |
+            type=ref,event=branch
+            type=ref,event=pr
+
+      - name: Build and push Docker image
+        uses: docker/build-push-action@v4
+        with:
+          context: .
+          file: utils/docker/Dockerfile
+          tags: ${{ steps.meta.outputs.tags }}
+          labels: ${{ steps.meta.outputs.labels }}
+          push: true

.github/workflows/docker-cleanup-pr.yml

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+name: Cleanup PR Images
+
+on:
+  pull_request:
+    types:
+        - closed
+
+jobs:
+  purge-image:
+    name: Delete PR images
+    runs-on: ubuntu-latest
+    steps:
+      - uses: bots-house/[email protected]
+        with:
+          owner: bihealth
+          name: reev
+          token: ${{ secrets.GITHUB_TOKEN }}
+          tag: pr-${{github.event.pull_request.number}}
+        continue-on-error: true

.github/workflows/docker-cleanup-untagged.yml

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+name: Cleanup Untagged Images
+
+on:
+  workflow_dispatch:
+  schedule:
+    - cron: "0 0 * * SUN"
+
+jobs:
+  delete-untagged-images:
+    name: Delete untagged images
+    runs-on: ubuntu-latest
+    steps:
+      - uses: bots-house/[email protected]
+        with:
+          owner: bihealth
+          name: reev
+          token: ${{ secrets.GITHUB_TOKEN }}
+          untagged-keep-latest: 3

.github/workflows/main.yml

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+name: CI
+
+on:
+  push:
+    branches:
+      - main
+  pull_request:
+    branches:
+      - main
+
+jobs:
+  Cancel-Previous:
+    runs-on: ubuntu-latest
+    if: github.ref != 'refs/heads/main'
+    steps:
+      - uses: khan/[email protected]
+        with:
+          workflows: "python.yml"
+        env:
+          GITHUB_TOKEN: '${{ secrets.GITHUB_TOKEN }}'
+
+  Backend-Lint:
+    runs-on: ubuntu-latest
+    steps:
+      - name: Checkout repository
+        uses: actions/checkout@v3
+
+      - name: Set up Python 3.10
+        uses: actions/setup-python@v4
+        with:
+          python-version: "3.10"
+          cache: "pipenv"
+          cache-dependency-path: |
+            backend/Pipfile.lock
+
+      - name: Install pipenv and deps
+        run: |
+          python -m pip install --upgrade pipenv wheel
+          make -C backend deps
+
+      - name: Lint source code
+        run: make -C backend lint
+
+  Backend-Test:
+    runs-on: ubuntu-latest
+    needs:
+      - Backend-Lint
+    steps:
+      - name: Checkout repository
+        uses: actions/checkout@v3
+
+      - name: Set up Python 3.10
+        uses: actions/setup-python@v4
+        with:
+          python-version: "3.10"
+          cache: "pipenv"
+          cache-dependency-path: |
+            backend/Pipfile.lock
+
+      - name: Install pipenv and deps
+        run: |
+          python -m pip install --upgrade pipenv wheel
+          make -C backend deps
+
+      - name: Install dependencies
+        run: make -C backend deps
+
+      - name: Run tests
+        run: make -C backend test
+
+      - name: Build docs
+        run: make -C backend docs
+
+      - name: Upload backend coverage reports to Codecov
+        uses: codecov/codecov-action@v3
+        with:
+          flags: backend
+          directory: backend
+        env:
+          CODECOV_TOKEN: ${{ secrets.CODECOV_TOKEN }}
+
+  Frontend-Lint:
+    runs-on: ubuntu-latest
+    steps:
+      - name: Checkout repository
+        uses: actions/checkout@v3
+
+      - name: Set up node 20.x
+        uses: actions/setup-node@v3
+        with:
+          noe-version: "20.x"
+          cache: "npm"
+          cache-dependency-path: |
+            frontend/package-lock.json
+
+      - name: Install deps
+        run: make -C frontend deps
+
+      - name: Lint source code
+        run: make -C frontend lint
+
+  Frontend-Test:
+    runs-on: ubuntu-latest
+    needs:
+      - Frontend-Lint
+    steps:
+      - name: Checkout repository
+        uses: actions/checkout@v3
+
+      - name: Set up node 20.x
+        uses: actions/setup-node@v3
+        with:
+          noe-version: "20.x"
+          cache: "npm"
+          cache-dependency-path: |
+            frontend/package-lock.json
+
+      - name: Install dependencies
+        run: make -C frontend deps
+
+      - name: Run tests
+        run: make -C frontend test
+
+      - name: Upload frontend coverage reports to Codecov
+        uses: codecov/codecov-action@v3
+        with:
+          flags: frontend
+          directory: frontend
+        env:
+          CODECOV_TOKEN: ${{ secrets.CODECOV_TOKEN }}