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R Package Check

R Package Check #642

Triggered via schedule November 13, 2024 01:03
Status Failure
Total duration 3h 14m 46s
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r.yml

on: schedule
Matrix: build
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14 errors and 14 warnings
build (4.2.1)
package or namespace load failed for ‘systemfonts’ in dyn.load(file, DLLpath = DLLpath, ...):
build (4.2.1)
loading failed
build (4.2.1)
package or namespace load failed for ‘httpuv’ in dyn.load(file, DLLpath = DLLpath, ...):
build (4.2.1)
loading failed
build (4.2.1)
package or namespace load failed for ‘openssl’ in dyn.load(file, DLLpath = DLLpath, ...):
build (4.2.1)
loading failed
build (4.2.1)
package or namespace load failed for ‘openssl’ in dyn.load(file, DLLpath = DLLpath, ...):
build (4.2.1)
loading failed
build (4.2.1)
package or namespace load failed for ‘openssl’ in dyn.load(file, DLLpath = DLLpath, ...):
build (4.2.1)
loading failed
build (4.2.1)
Packages required but not available:
build (4.2.1)
Packages required but not available:
build (4.2.1)
R CMD check found ERRORs
build (4.2.1)
Process completed with exit code 1.
build (4.2.1)
The following actions uses node12 which is deprecated and will be forced to run on node16: r-lib/actions/setup-r@f57f1301a053485946083d7a45022b278929a78a. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
build (4.2.1)
The following actions use a deprecated Node.js version and will be forced to run on node20: actions/checkout@v3, r-lib/actions/setup-r@f57f1301a053485946083d7a45022b278929a78a. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
build (4.2.1)
pkg-config 0.29.2_3 is already installed and up-to-date. To reinstall 0.29.2_3, run: brew reinstall pkg-config
build (4.2.1)
The `set-output` command is deprecated and will be disabled soon. Please upgrade to using Environment Files. For more information see: https://github.blog/changelog/2022-10-11-github-actions-deprecating-save-state-and-set-output-commands/
build (4.2.1)
package ‘AnnotationDbi’ was built under R version 4.2.2
build (4.2.1)
package ‘S4Vectors’ was built under R version 4.2.2
build (4.2.1)
Package 'KEGG.db' is deprecated and will be removed from Bioconductor
build (4.2.1)
package ‘AnnotationDbi’ was built under R version 4.2.2
build (4.2.1)
package ‘S4Vectors’ was built under R version 4.2.2
build (4.2.1)
Package 'KEGG.db' is deprecated and will be removed from Bioconductor
build (4.2.1)
package ‘AnnotationDbi’ was built under R version 4.2.2
build (4.2.1)
package ‘S4Vectors’ was built under R version 4.2.2
build (4.2.1)
package ‘AnnotationDbi’ was built under R version 4.2.2
build (4.2.1)
package ‘S4Vectors’ was built under R version 4.2.2