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ENH: Add flip, inv, mt, and part entities #688

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merged 3 commits into from
Dec 19, 2020

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@tsalo tsalo commented Dec 8, 2020

BIDS has added new entities for flip angle (flip), inversion time (inv), magnetization transfer state (mt), and component of the complex signal (part). These entities have been merged into the specification, but the updates haven't been released yet, although we expect a release within the next month or so.

I didn't see any associated tests for the echo entity, so I'm guessing that there are no tests associated with the config files. Please correct me if I'm wrong.

Changes proposed:

  • Add patterns for flip, inv, mt, and part entities.
  • Incorporate part into path patterns. The other entities have not been integrated into any suffixes yet, as there are still BEP001-related PRs pending.

This involves splitting the phase suffix from the bold, cbv, and sbref suffixes.
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tsalo commented Dec 18, 2020

Since there's no way to specify that magnitude data should be assumed when part is not included, I think this PR is ready for review.

@effigies effigies merged commit 11f665b into bids-standard:master Dec 19, 2020
@tsalo tsalo deleted the new-entities branch December 19, 2020 15:43
tsalo added a commit to tsalo/pybids that referenced this pull request May 3, 2021
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