Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Jump to bottom

ieeg_epilepsy / ieeg_epilepsy_ecog: Fix CoordinateSystem #219

Closed
wants to merge 5 commits into from
Closed

ieeg_epilepsy / ieeg_epilepsy_ecog: Fix CoordinateSystem #219

Show file tree
Hide file tree
Changes from all commits
Commits
Show all changes
5 commits
Select commit Hold shift + click to select a range
f2c273b
Fixed space- and CoordinateSystem
ftadel Dec 5, 2020
26f5791
Fixed -space: MNI152Lin => MNI152NLin6Sym (spm8 registration)
ftadel Dec 5, 2020
02bb826
Fixed space- and CoordinateSystem
ftadel Dec 5, 2020
bcf9761
Rename sub-01_ses-postimp_space-MNI152_electrodes.tsv to sub-01_ses-p…
ftadel Dec 5, 2020
7830cca
other=>Other
ftadel Dec 5, 2020
File filter

Filter by extension

Filter by extension
Conversations
Failed to load comments.
Loading
Jump to
Jump to file
Failed to load files.
Loading
Diff view
Diff view
2 changes: 1 addition & 1 deletion ...ses-postimp_space-MNI152_coordsystem.json → ...imp_space-MNI152NLin6Sym_coordsystem.json
View file
Open in desktop
Original file line number Diff line number Diff line change
@@ -1,5 +1,5 @@
{
"iEEGCoordinateSystem": "MNI152",
"iEEGCoordinateSystem": "Other",
"iEEGCoordinateUnits": "mm",
"iEEGCoordinateSystemDescription": "MNI152 affine normalization with SPM12 function spm_maff8",
"iEEGCoordinateProcessingDescription": "Deman, P., Bhattacharjee, M., Tadel, F., Job, A. S., Rivière, D., Cointepas, Y., Kahane, P., … David, O. (2018). IntrAnat Electrodes: A Free Database and Visualization Software for Intracranial Electroencephalographic Data Processed for Case and Group Studies. Frontiers in neuroinformatics, 12, 40. doi:10.3389/fninf.2018.00040",
Expand Down
0 ...1_ses-postimp_space-MNI152_electrodes.tsv → ...stimp_space-MNI152NLin6Sym_electrodes.tsv
View file
Open in desktop
File renamed without changes.
4 changes: 2 additions & 2 deletions ...-postimp_space-MNI152Lin_coordsystem.json → ...imp_space-MNI152NLin6Sym_coordsystem.json
View file
Open in desktop
Original file line number Diff line number Diff line change
@@ -1,8 +1,8 @@
{
"iEEGCoordinateSystem": "MNI152Lin",
"iEEGCoordinateSystem": "Other",
"iEEGCoordinateUnits": "mm",
"iEEGCoordinateSystemDescription": "SEEG contact coordinates in MNI152 normalized space",
"iEEGCoordinateProcessingDescription": "SEEG contacts manually placed with Brainstorm on the post-implanation T1 MRI, which was normalized with SPM12 function spm_maff8",
"iEEGCoordinateProcessingReference": "Hermes et al., 2010 JNeuroMeth",
"IntendedFor": "sub-ecog01/ses-postimp/anat/sub-ecog01_ses-postimp_T1w.nii.gz"
}
}
0 ...es-postimp_space-MNI152Lin_electrodes.tsv → ...stimp_space-MNI152NLin6Sym_electrodes.tsv
View file
Open in desktop
File renamed without changes.
4 changes: 2 additions & 2 deletions ...epsy_ecog/sub-ecog01/ses-postimp/ieeg/sub-ecog01_ses-postimp_space-other_coordsystem.json
View file
Open in desktop
Original file line number Diff line number Diff line change
@@ -1,8 +1,8 @@
{
"iEEGCoordinateSystem": "other",
"iEEGCoordinateSystem": "Other",
"iEEGCoordinateUnits": "mm",
"iEEGCoordinateSystemDescription": "Subject head coordinates, as defined by the sform transformation in the associated nii file",
"iEEGCoordinateProcessingDescription": "SEEG contacts manually placed with Brainstorm on the post-implanation T1 MRI",
"iEEGCoordinateProcessingReference": "https://neuroimage.usc.edu/brainstorm/Tutorials/ECoG",
"IntendedFor": "sub-ecog01/ses-postimp/anat/sub-ecog01_ses-postimp_T1w.nii.gz"
}
}