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updated constants
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bernt-matthias committed May 2, 2018
1 parent 8702dee commit 5b2792a
Showing 1 changed file with 4 additions and 4 deletions.
8 changes: 4 additions & 4 deletions tools/idba_ud/idba_ud.xml
Original file line number Diff line number Diff line change
Expand Up @@ -46,16 +46,16 @@
</command>

<inputs>
<param argument="--read" type="data" format="fasta" label="Fasta read file. Lower or equal to 250b"/>
<param argument="--long_read" type="data" format="fasta" optional="true" label="Fasta long read file. More than 250b"/>
<param argument="--read" type="data" format="fasta" label="Fasta read file. Lower or equal to 600b"/>
<param argument="--long_read" type="data" format="fasta" optional="true" label="Fasta long read file. More than 600b"/>

<param argument="--read_level_2" type="data" format="fasta" optional="true" label="Fasta Paired-end reads for second level scaffolds"/>
<param argument="--read_level_3" type="data" format="fasta" optional="true" label="Fasta Paired-end reads for third level scaffolds"/>
<param argument="--read_level_4" type="data" format="fasta" optional="true" label="Fasta Paired-end reads for fourth level scaffolds"/>
<param argument="--read_level_5" type="data" format="fasta" optional="true" label="Fasta Paired-end reads for fifth level scaffolds"/>

<param argument="--mink" type="integer" value="20" max="124" label="Minimum k value. Lower or equal to 124"/>
<param argument="--maxk" type="integer" value="100" max="124" label="Maximum k value. Lower or equal to 124"/>
<param argument="--mink" type="integer" value="20" max="312" label="Minimum k value. Lower or equal to 312"/>
<param argument="--maxk" type="integer" value="100" max="312" label="Maximum k value. Lower or equal to 312"/>
<param argument="--step" type="integer" value="20" label="Increment of k-mer of each iteration"/>
<param argument="--inner_mink" type="integer" value="10" label="Inner minimum k value"/>
<param argument="--inner_step" type="integer" value="5" label="Inner increment of k-mer"/>
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