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Flip default for --experimental_ignore_deprecated_instrumentation_spec
This stops using legacy InstrumentationSpec configuration by default for the few native rules which used this legacy configuration (filegroup, shell script, and Python), instead using a configuration which behaves as putting "srcs" under the source_attributes parameter of coverage_common.instrumented_files_info and "deps" and "data" under dependency_attributes. RELNOTES: Update coverage configuration for Python, filegroup, and shell script rules to distinguish between source and dependency attributes. PiperOrigin-RevId: 323030795
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