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build: update to latest @rollup/plugin-commonjs version
Updates the project to the latest version of `@rollup/plugin-commonjs`. For this, `rollup` also needs to be updated as the peer dependency from the CommonJS plugin would not match otherwise. This results in a change in golden files as the rollup output is slightly different. We update the goldens as part of this commit. The update to the latest CommonJS rollup plugin version is in preparation of bundling the runfile helpers into a checked-in file. Since the runfile helpers use a dynamic import for loading the NodeJS patches script, the CommonJS rollup plugin needs to respect those. Currently the CommonJS plugin just invalidates the dynamic require, while the newer version allows us to preserve the dynamic CommonJS import as is.
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