Add network argument to function call

bacpop · Oct 11, 2024 · 948f468 · 948f468
1 parent 52dde86
commit 948f468
Showing 1 changed file with 2 additions and 1 deletion.
diff --git a/PopPUNK/lineages.py b/PopPUNK/lineages.py
@@ -440,7 +440,8 @@ def query_db(args):
                             accessory,
                             args.gpu_dist,
                             args.gpu_graph,
-                            save_partial_query_graph = False)
+                            save_partial_query_graph = False,
+                            use_full_network = True)
             overall_lineage[strain] = createOverallLineage(rank_list, lineageClustering)
 
     # Print combined strain and lineage clustering